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Answer: A: mRNA-seq cross-species analysis, is it possible?
13.7 years ago Davis McCarthy ▴ 260
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8.8k
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Answer: A: edgeR vs DESeq for comparison without replicate
13.7 years ago Davis McCarthy ▴ 260
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Answer: A: How to generate count data with desired overdispersion
13.7 years ago Davis McCarthy ▴ 260
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1.4k
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Answer: A: R package for DGE analysis between multiple RNA-Seq samples
13.8 years ago Davis McCarthy ▴ 260
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926
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edgeR users update to v2.2.5
edgeR edgeR
13.8 years ago Davis McCarthy ▴ 260
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3.0k
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Comment: C: edgeR - multiple comparisions
13.8 years ago Davis McCarthy ▴ 260
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3.0k
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edgeR - multiple comparisions
Epigenetics GO edgeR Epigenetics GO edgeR
updated 13.8 years ago by ▴ 320 • written 13.8 years ago by ▴ 260
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Comment: C: edgeR - multiple comparisions
13.8 years ago Davis McCarthy ▴ 260
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2.1k
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Comment: C: edgeR - multiple comparisions
13.9 years ago Davis McCarthy ▴ 260
0
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1
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2.7k
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Answer: A: EdgeR- equal number of columns per group?
13.9 years ago Davis McCarthy ▴ 260
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2.2k
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Answer: A: calcNormFactors - normalization
13.9 years ago Davis McCarthy ▴ 260
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2.2k
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Answer: A: calcNormFactors - normalization
13.9 years ago Davis McCarthy ▴ 260
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721
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problems with estimateGLMTrendedDisp()
edgeR edgeR
13.9 years ago Davis McCarthy ▴ 260
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Answer: A: problems with estimateGLMTrendedDisp()
13.9 years ago Davis McCarthy ▴ 260
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1
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2.3k
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Answer: A: RNASeq: normalization issues
13.9 years ago Davis McCarthy ▴ 260
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1
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4.1k
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Comment: C: edgeR- plotSmear
14.0 years ago Davis McCarthy ▴ 260
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4.1k
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Answer: A: edgeR- plotSmear
14.0 years ago Davis McCarthy ▴ 260
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1.1k
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Using DESeq or EdgeR for Exon Differential Expression Analysis
affy edgeR DESeq affy edgeR DESeq
14.0 years ago Davis McCarthy ▴ 260
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3.9k
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Answer: A: EdgeR GLM gene expression analysis of 3 groups
14.0 years ago Davis McCarthy ▴ 260
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0
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1.3k
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Answer: A: Question for NGS seq data (time couse)
14.1 years ago Davis McCarthy ▴ 260
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2.7k
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Answer: A: edgeR - tagwise dispersion
14.1 years ago Davis McCarthy ▴ 260
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1.4k
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Comment: C: GO term enrichment
14.1 years ago Davis McCarthy ▴ 260
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1
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1.5k
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Answer: A: edgeR
14.1 years ago Davis McCarthy ▴ 260
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1.1k
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EdgeR - problems running estimateCRDisp
RNASeq edgeR RNASeq edgeR
14.3 years ago Davis McCarthy ▴ 260
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1.3k
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Comment: C: Is there some packages for RNA-seq data analysis?
14.7 years ago Davis McCarthy ▴ 260
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1.8k
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logFC in edgeR
edgeR edgeR
14.8 years ago Davis McCarthy ▴ 260
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