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Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
7 weeks ago Ou, Jianhong ★ 1.3k
0
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0
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421
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Comment: Comment: ATACseqTFEA - preparebindingSites() for whole genome?
10 weeks ago Ou, Jianhong ★ 1.3k
0
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1
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421
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Comment: Comment: ATACseqTFEA - preparebindingSites() for whole genome?
12 weeks ago Ou, Jianhong ★ 1.3k
0
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1
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617
views
Answer: Answer: ATACseqQC shiftGAlignmentsList() problem
4 months ago Ou, Jianhong ★ 1.3k
0
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0
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617
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Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
4 months ago Ou, Jianhong ★ 1.3k
0
votes
1
reply
617
views
Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
4 months ago Ou, Jianhong ★ 1.3k
0
votes
1
reply
421
views
Answer: Answer: ATACseqTFEA - preparebindingSites() for whole genome?
5 months ago Ou, Jianhong ★ 1.3k
0
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0
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271
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Comment: Comment: Incorrect display of Y-axis
5 months ago Ou, Jianhong ★ 1.3k
2
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2
replies
1.6k
views
Answer: Answer: How to apply ChIPpeakAnno to your Granger object to annotate the peaks?
12 months ago Ou, Jianhong ★ 1.3k
0
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0
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540
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Comment: Comment: Error in ATACseqQC bamQC analysis
15 months ago Ou, Jianhong ★ 1.3k
1
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0
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594
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Answer: Answer: Interpretation of $vennCounts output "Others"
16 months ago Ou, Jianhong ★ 1.3k
0
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0
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693
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Comment: Comment: AssignChromosomeRegion not working in Rstudio 4.2
23 months ago Ou, Jianhong ★ 1.3k
1
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1
reply
817
views
Comment: Comment: motifStack Plotting the correct data positions on x axis
2.1 years ago Ou, Jianhong ★ 1.3k
2
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1
reply
817
views
Answer: Answer: motifStack Plotting the correct data positions on x axis
2.1 years ago Ou, Jianhong ★ 1.3k
1
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0
replies
881
views
Comment: Comment: trackViewer assigning track colors
2.2 years ago Ou, Jianhong ★ 1.3k
0
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0
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2.1k
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Comment: Comment: Problem converting a bed file to granges using togranges chippeakanno
2.2 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
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Comment: Comment: TSSEscore function in ATACseqQC package
2.2 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
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Comment: Comment: TSSEscore function in ATACseqQC package
2.2 years ago Ou, Jianhong ★ 1.3k
1
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2
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1.4k
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Comment: Comment: TSSEscore function in ATACseqQC package
2.2 years ago Ou, Jianhong ★ 1.3k
0
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0
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2.0k
views
Answer: Answer: Error in .order_seqlevels(chrom_sizes[, "chrom"])
2.5 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.2k
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Answer: Answer: trackViewer peak visualization
2.5 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.7k
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Answer: Answer: trackViewer bigWig smoothing
2.5 years ago Ou, Jianhong ★ 1.3k
0
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1
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947
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Answer: Answer: trackViewer font
2.5 years ago Ou, Jianhong ★ 1.3k
0
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1
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698
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Hard coding in DiffBind DBA.R line 968
DiffBind
updated 2.9 years ago by ★ 5.1k • written 2.9 years ago by ★ 1.3k
0
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0
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3.4k
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Comment: Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.0 years ago Ou, Jianhong ★ 1.3k
0
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1
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3.4k
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Comment: Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.0 years ago Ou, Jianhong ★ 1.3k
1
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1
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985
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Answer: Answer: ribosomeProfilingQC - countReads function - is it possible to consider library
3.1 years ago Ou, Jianhong ★ 1.3k
0
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1
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985
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Comment: Comment: ribosomeProfilingQC - countReads function - is it possible to consider library
3.1 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
758
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Comment: Comment: trackViewer: File format detection
3.4 years ago Ou, Jianhong ★ 1.3k
0
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1
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758
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Answer: Answer: trackViewer: File format detection
3.4 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.1k
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Comment: C: How to use a fimo BED output as GRanges object in factorFootprints from ATACseqQ
3.6 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.9k
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Answer: A: ATACseqQC R package for QC scores (TSS, FRIP, NFR, IDR)
3.7 years ago Ou, Jianhong ★ 1.3k
1
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0
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9.1k
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Answer: A: Interpreting TSS Enrichment Score Summary
3.7 years ago Ou, Jianhong ★ 1.3k
2
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1
reply
788
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Comment: C: how to suppress makeVennDiagram plot
3.7 years ago Ou, Jianhong ★ 1.3k
0
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0
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947
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Comment: C: Subsampling when adjusting the read start sites in the ATACseqQC guide
3.7 years ago Ou, Jianhong ★ 1.3k
1
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2
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947
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Comment: C: Subsampling when adjusting the read start sites in the ATACseqQC guide
3.7 years ago Ou, Jianhong ★ 1.3k
0
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0
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1.4k
views
Comment: C: ATACSeqQC - error when splitting files using mm10
3.9 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
views
Comment: C: ATACSeqQC - error when splitting files using mm10
3.9 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
1.4k
views
Comment: C: ATACSeqQC - error when splitting files using mm10
3.9 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
2.3k
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Comment: C: ATAC-QC shiftGAlignmentsList function
4.0 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
431
views
Comment: C: ATACseqQC and Rsamtools scanBam
4.0 years ago Ou, Jianhong ★ 1.3k
1
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0
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451
views
Answer: C: Virus found in GeneNetworkBuilder_1.28.1.tar.gz
4.2 years ago Ou, Jianhong ★ 1.3k
0
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0
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797
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Comment: C: TrackViewer Vignette Err: attr must be a slot name of xscale object
4.3 years ago Ou, Jianhong ★ 1.3k
0
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0
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1.0k
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Comment: C: trackViewer: how to make lolliplots for methylation data
4.4 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.0k
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Comment: C: trackViewer: how to make lolliplots for methylation data
4.5 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
620
views
Answer: A: Can I use trackViewer to generate methylation lolliops with my own gene models a
4.5 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
1.9k
views
Answer: A: Error in running ATACseqQC
4.5 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
1.6k
views
Comment: C: ATACseqQC installation fails at shiny step
4.6 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
1.6k
views
Comment: C: ATACseqQC installation fails at shiny step
4.6 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
1.2k
views
Comment: C: How to change the size of yaxis in motifstack
4.7 years ago Ou, Jianhong ★ 1.3k
227 results • Page 1 of 5
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