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3.4k
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Comment: Comment: Too much data for Diffbind
5 months ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
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Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
12 months ago Ou, Jianhong ★ 1.3k
0
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0
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779
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Comment: Comment: ATACseqTFEA - preparebindingSites() for whole genome?
13 months ago Ou, Jianhong ★ 1.3k
0
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1
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779
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Comment: Comment: ATACseqTFEA - preparebindingSites() for whole genome?
14 months ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
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Answer: Answer: ATACseqQC shiftGAlignmentsList() problem
15 months ago Ou, Jianhong ★ 1.3k
0
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0
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1.4k
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Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
15 months ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
views
Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
15 months ago Ou, Jianhong ★ 1.3k
0
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1
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779
views
Answer: Answer: ATACseqTFEA - preparebindingSites() for whole genome?
16 months ago Ou, Jianhong ★ 1.3k
0
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0
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506
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Comment: Comment: Incorrect display of Y-axis
16 months ago Ou, Jianhong ★ 1.3k
2
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2
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2.5k
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Answer: Answer: How to apply ChIPpeakAnno to your Granger object to annotate the peaks?
23 months ago Ou, Jianhong ★ 1.3k
0
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0
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834
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Comment: Comment: Error in ATACseqQC bamQC analysis
2.2 years ago Ou, Jianhong ★ 1.3k
1
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0
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851
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Answer: Answer: Interpretation of $vennCounts output "Others"
2.3 years ago Ou, Jianhong ★ 1.3k
0
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0
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933
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Comment: Comment: AssignChromosomeRegion not working in Rstudio 4.2
2.9 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.1k
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Comment: Comment: motifStack Plotting the correct data positions on x axis
3.0 years ago Ou, Jianhong ★ 1.3k
2
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1
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1.1k
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Answer: Answer: motifStack Plotting the correct data positions on x axis
3.0 years ago Ou, Jianhong ★ 1.3k
1
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0
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1.3k
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Comment: Comment: trackViewer assigning track colors
3.1 years ago Ou, Jianhong ★ 1.3k
0
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0
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3.2k
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Comment: Comment: Problem converting a bed file to granges using togranges chippeakanno
3.1 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.8k
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Comment: Comment: TSSEscore function in ATACseqQC package
3.1 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.8k
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Comment: Comment: TSSEscore function in ATACseqQC package
3.1 years ago Ou, Jianhong ★ 1.3k
1
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2
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1.8k
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Comment: Comment: TSSEscore function in ATACseqQC package
3.2 years ago Ou, Jianhong ★ 1.3k
0
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0
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2.6k
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Answer: Answer: Error in .order_seqlevels(chrom_sizes[, "chrom"])
3.4 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.8k
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Answer: Answer: trackViewer peak visualization
3.4 years ago Ou, Jianhong ★ 1.3k
0
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1
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2.4k
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Answer: Answer: trackViewer bigWig smoothing
3.4 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.3k
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Answer: Answer: trackViewer font
3.4 years ago Ou, Jianhong ★ 1.3k
0
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1
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933
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Hard coding in DiffBind DBA.R line 968
DiffBind
updated 3.8 years ago by ★ 5.2k • written 3.8 years ago by ★ 1.3k
0
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0
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4.8k
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Comment: Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.9 years ago Ou, Jianhong ★ 1.3k
0
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1
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4.8k
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Comment: Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.9 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.3k
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Answer: Answer: ribosomeProfilingQC - countReads function - is it possible to consider library
4.1 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.3k
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Comment: Comment: ribosomeProfilingQC - countReads function - is it possible to consider library
4.1 years ago Ou, Jianhong ★ 1.3k
0
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0
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1.0k
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Comment: Comment: trackViewer: File format detection
4.3 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.0k
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Answer: Answer: trackViewer: File format detection
4.3 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.5k
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Comment: C: How to use a fimo BED output as GRanges object in factorFootprints from ATACseqQ
4.6 years ago Ou, Jianhong ★ 1.3k
0
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1
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2.5k
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Answer: A: ATACseqQC R package for QC scores (TSS, FRIP, NFR, IDR)
4.6 years ago Ou, Jianhong ★ 1.3k
1
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0
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12k
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Answer: A: Interpreting TSS Enrichment Score Summary
4.6 years ago Ou, Jianhong ★ 1.3k
2
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1
reply
1.1k
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Comment: C: how to suppress makeVennDiagram plot
4.6 years ago Ou, Jianhong ★ 1.3k
0
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0
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1.3k
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Comment: C: Subsampling when adjusting the read start sites in the ATACseqQC guide
4.6 years ago Ou, Jianhong ★ 1.3k
1
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2
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1.3k
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Comment: C: Subsampling when adjusting the read start sites in the ATACseqQC guide
4.6 years ago Ou, Jianhong ★ 1.3k
0
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0
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1.9k
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Comment: C: ATACSeqQC - error when splitting files using mm10
4.8 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.9k
views
Comment: C: ATACSeqQC - error when splitting files using mm10
4.8 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.9k
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Comment: C: ATACSeqQC - error when splitting files using mm10
4.8 years ago Ou, Jianhong ★ 1.3k
0
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0
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3.0k
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Comment: C: ATAC-QC shiftGAlignmentsList function
4.9 years ago Ou, Jianhong ★ 1.3k
0
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0
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641
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Comment: C: ATACseqQC and Rsamtools scanBam
4.9 years ago Ou, Jianhong ★ 1.3k
1
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0
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595
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Answer: C: Virus found in GeneNetworkBuilder_1.28.1.tar.gz
5.1 years ago Ou, Jianhong ★ 1.3k
0
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0
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1.0k
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Comment: C: TrackViewer Vignette Err: attr must be a slot name of xscale object
5.3 years ago Ou, Jianhong ★ 1.3k
0
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0
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1.5k
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Comment: C: trackViewer: how to make lolliplots for methylation data
5.4 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.5k
views
Comment: C: trackViewer: how to make lolliplots for methylation data
5.4 years ago Ou, Jianhong ★ 1.3k
0
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0
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843
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Answer: A: Can I use trackViewer to generate methylation lolliops with my own gene models a
5.4 years ago Ou, Jianhong ★ 1.3k
0
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1
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2.6k
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Answer: A: Error in running ATACseqQC
5.4 years ago Ou, Jianhong ★ 1.3k
0
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0
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2.1k
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Comment: C: ATACseqQC installation fails at shiny step
5.6 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
2.1k
views
Comment: C: ATACseqQC installation fails at shiny step
5.6 years ago Ou, Jianhong ★ 1.3k
228 results • Page 1 of 5
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