Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
answers
0
votes
1
reply
636
views
Answer:
Answer: ATACseqQC shiftGAlignmentsList() problem
4 months ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
433
views
Answer:
Answer: ATACseqTFEA - preparebindingSites() for whole genome?
5 months ago
Ou, Jianhong
★ 1.3k
2
votes
2
replies
1.7k
views
Answer:
Answer: How to apply ChIPpeakAnno to your Granger object to annotate the peaks?
12 months ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
599
views
Answer:
Answer: Interpretation of $vennCounts output "Others"
16 months ago
Ou, Jianhong
★ 1.3k
2
votes
1
reply
828
views
Answer:
Answer: motifStack Plotting the correct data positions on x axis
2.1 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
2.1k
views
Answer:
Answer: Error in .order_seqlevels(chrom_sizes[, "chrom"])
2.5 years ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
1.2k
views
Answer:
Answer: trackViewer peak visualization
2.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.7k
views
Answer:
Answer: trackViewer bigWig smoothing
2.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
958
views
Answer:
Answer: trackViewer font
2.5 years ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
997
views
Answer:
Answer: ribosomeProfilingQC - countReads function - is it possible to consider library
3.1 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
767
views
Answer:
Answer: trackViewer: File format detection
3.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.9k
views
Answer:
A: ATACseqQC R package for QC scores (TSS, FRIP, NFR, IDR)
3.7 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
9.2k
views
Answer:
A: Interpreting TSS Enrichment Score Summary
3.7 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
454
views
Answer:
C: Virus found in GeneNetworkBuilder_1.28.1.tar.gz
4.2 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
627
views
Answer:
A: Can I use trackViewer to generate methylation lolliops with my own gene models a
4.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
2.0k
views
Answer:
A: Error in running ATACseqQC
4.5 years ago
Ou, Jianhong
★ 1.3k
1
vote
2
replies
1.6k
views
Answer:
A: trackViewer, the interactive version, can't view negative values in bigWig
4.7 years ago
Ou, Jianhong
★ 1.3k
0
votes
2
replies
1.9k
views
Answer:
A: atacseqQC error while splittin the bamfile
5.0 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.2k
views
Answer:
A: chippeakanno file reading error
5.1 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
662
views
Answer:
A: how can I convert a sequence to number
5.1 years ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
1.5k
views
Answer:
A: The meaning of results produced by the bamQC function implemented in the ATACseq
5.2 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
1.4k
views
Answer:
A: Methylation data visualization using methyAnalysis with minfi
5.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.5k
views
Answer:
A: ChIPpeakAnno overlap peaks with TSS returns more than TSS overlap
5.6 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.0k
views
Answer:
A: Compare the DNA footprinting between different samples when using ATACseqQC
5.8 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.5k
views
Answer:
A: use factorFootprints function in ATACseqQC to get DNA footprinting for certain g
5.8 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
902
views
Answer:
A: ATACseqQC questions in R language
5.9 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
956
views
Answer:
A: Row clustering featureAlignedHeatmap function (ChipPeakAnno package)
6.0 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.6k
views
Answer:
A: Issue installing packages ATACseqQC and GO.db
6.1 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.1k
views
Answer:
A: motifStack importMatrix problem reading meme file to pcm
6.1 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.3k
views
Answer:
A: integer overflow in ChIPpeakAnno assignChromosomeRegion
6.2 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
934
views
Answer:
A: Custom regions in assignChromosomeRegion?
6.2 years ago
Ou, Jianhong
★ 1.3k
2
votes
1
reply
850
views
Answer:
A: motifStack: how to make the start of motif logos have the same distance to the c
6.3 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.1k
views
Answer:
A: Identification of Overrepresented Transcription Factor Binding Motifs in the Pro
6.3 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
961
views
Answer:
A: Attempts to create a lolliplot from 1000 genomes .popvcf file using trackViewer
6.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.1k
views
Answer:
A: ATACseqQC needs too much memory
6.4 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
1.5k
views
Answer:
A: ChIPpeakAnno binOverGene error
6.4 years ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
9.8k
views
Answer:
A: How to change seqlevels in a GRanges object
6.8 years ago
Ou, Jianhong
★ 1.3k
3
votes
1
reply
1.3k
views
Answer:
A: Annotation Database for ChIPpeakAnno
6.8 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
976
views
Answer:
A: trackviewer lolliplot pie.stack
6.9 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
3.8k
views
Answer:
A: mm10 phastCons data for use with ATACseqQC
6.9 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
2.2k
views
Answer:
A: RNAseq read coverage plot: What tool?
7.0 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
2.4k
views
Answer:
A: ChIPpeakAnno :findOverlapsOfPeaks: number for overlap peak in venn diagram is d
7.1 years ago
Ou, Jianhong
★ 1.3k
2
votes
1
reply
3.2k
views
Answer:
A: ChIPpeakAnno, MACS format annotation
7.1 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
1.6k
views
Answer:
A: ChIPpeakAnno-annotation of peaklist with gene names, creating heat maps
7.4 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
1.6k
views
Answer:
A: ChIPpeakAnno-annotation of peaklist with gene names, creating heat maps
7.4 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
2.9k
views
Answer:
A: ChIPpeakAnno-problem exporting data due to "arguments imply differing number of
7.4 years ago
Ou, Jianhong
★ 1.3k
3
votes
0
replies
1.6k
views
Answer:
A: How to fix ChIPPeakAnno error in adding gene names to annotated peaks?
7.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
2.5k
views
Answer:
A: problem to load data into ChIPpeakAnno
7.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.8k
views
Answer:
A: Convert HOMER motif matrix to pfm?
7.7 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.5k
views
Answer:
A: Plotting protein position weighted matrices in seqLogo and DiffLogo
7.8 years ago
Ou, Jianhong
★ 1.3k
86 results • Page
1 of 2
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6