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0
votes
1
reply
641
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Comment:
Comment: ATACseqQC shiftGAlignmentsList() problem
8 weeks ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
438
views
Comment:
Comment: ATACseqTFEA - preparebindingSites() for whole genome?
11 weeks ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
438
views
Comment:
Comment: ATACseqTFEA - preparebindingSites() for whole genome?
3 months ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
641
views
Answer:
Answer: ATACseqQC shiftGAlignmentsList() problem
4 months ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
641
views
Comment:
Comment: ATACseqQC shiftGAlignmentsList() problem
4 months ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
641
views
Comment:
Comment: ATACseqQC shiftGAlignmentsList() problem
4 months ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
438
views
Answer:
Answer: ATACseqTFEA - preparebindingSites() for whole genome?
5 months ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
276
views
Comment:
Comment: Incorrect display of Y-axis
5 months ago
Ou, Jianhong
★ 1.3k
2
votes
2
replies
1.7k
views
Answer:
Answer: How to apply ChIPpeakAnno to your Granger object to annotate the peaks?
12 months ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
553
views
Comment:
Comment: Error in ATACseqQC bamQC analysis
15 months ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
599
views
Answer:
Answer: Interpretation of $vennCounts output "Others"
16 months ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
703
views
Comment:
Comment: AssignChromosomeRegion not working in Rstudio 4.2
23 months ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
831
views
Comment:
Comment: motifStack Plotting the correct data positions on x axis
2.1 years ago
Ou, Jianhong
★ 1.3k
2
votes
1
reply
831
views
Answer:
Answer: motifStack Plotting the correct data positions on x axis
2.1 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
900
views
Comment:
Comment: trackViewer assigning track colors
2.2 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
2.1k
views
Comment:
Comment: Problem converting a bed file to granges using togranges chippeakanno
2.2 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.4k
views
Comment:
Comment: TSSEscore function in ATACseqQC package
2.2 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.4k
views
Comment:
Comment: TSSEscore function in ATACseqQC package
2.2 years ago
Ou, Jianhong
★ 1.3k
1
vote
2
replies
1.4k
views
Comment:
Comment: TSSEscore function in ATACseqQC package
2.3 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
2.1k
views
Answer:
Answer: Error in .order_seqlevels(chrom_sizes[, "chrom"])
2.5 years ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
1.2k
views
Answer:
Answer: trackViewer peak visualization
2.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.7k
views
Answer:
Answer: trackViewer bigWig smoothing
2.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
965
views
Answer:
Answer: trackViewer font
2.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
704
views
Hard coding in DiffBind DBA.R line 968
DiffBind
updated 2.9 years ago by
Rory Stark
★ 5.2k • written 2.9 years ago by
Ou, Jianhong
★ 1.3k
0
votes
0
replies
3.5k
views
Comment:
Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.0 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
3.5k
views
Comment:
Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.0 years ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
1.0k
views
Answer:
Answer: ribosomeProfilingQC - countReads function - is it possible to consider library
3.1 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.0k
views
Comment:
Comment: ribosomeProfilingQC - countReads function - is it possible to consider library
3.2 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
769
views
Comment:
Comment: trackViewer: File format detection
3.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
769
views
Answer:
Answer: trackViewer: File format detection
3.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.1k
views
Comment:
C: How to use a fimo BED output as GRanges object in factorFootprints from ATACseqQ
3.7 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.9k
views
Answer:
A: ATACseqQC R package for QC scores (TSS, FRIP, NFR, IDR)
3.7 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
9.2k
views
Answer:
A: Interpreting TSS Enrichment Score Summary
3.7 years ago
Ou, Jianhong
★ 1.3k
2
votes
1
reply
798
views
Comment:
C: how to suppress makeVennDiagram plot
3.7 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
959
views
Comment:
C: Subsampling when adjusting the read start sites in the ATACseqQC guide
3.7 years ago
Ou, Jianhong
★ 1.3k
1
vote
2
replies
959
views
Comment:
C: Subsampling when adjusting the read start sites in the ATACseqQC guide
3.7 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.4k
views
Comment:
C: ATACSeqQC - error when splitting files using mm10
3.9 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.4k
views
Comment:
C: ATACSeqQC - error when splitting files using mm10
3.9 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.4k
views
Comment:
C: ATACSeqQC - error when splitting files using mm10
3.9 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
2.3k
views
Comment:
C: ATAC-QC shiftGAlignmentsList function
4.0 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
434
views
Comment:
C: ATACseqQC and Rsamtools scanBam
4.0 years ago
Ou, Jianhong
★ 1.3k
1
vote
0
replies
454
views
Answer:
C: Virus found in GeneNetworkBuilder_1.28.1.tar.gz
4.2 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
803
views
Comment:
C: TrackViewer Vignette Err: attr must be a slot name of xscale object
4.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.0k
views
Comment:
C: trackViewer: how to make lolliplots for methylation data
4.5 years ago
Ou, Jianhong
★ 1.3k
1
vote
1
reply
1.0k
views
Comment:
C: trackViewer: how to make lolliplots for methylation data
4.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
629
views
Answer:
A: Can I use trackViewer to generate methylation lolliops with my own gene models a
4.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
2.0k
views
Answer:
A: Error in running ATACseqQC
4.5 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.7k
views
Comment:
C: ATACseqQC installation fails at shiny step
4.6 years ago
Ou, Jianhong
★ 1.3k
0
votes
1
reply
1.7k
views
Comment:
C: ATACseqQC installation fails at shiny step
4.6 years ago
Ou, Jianhong
★ 1.3k
0
votes
0
replies
1.2k
views
Comment:
C: How to change the size of yaxis in motifstack
4.7 years ago
Ou, Jianhong
★ 1.3k
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