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0
votes
1
reply
2.1k
views
Comment:
C: necessity of moderated t statistic and false discoveries for small predefined ge
12.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
942
views
cutoff for NUSE plot in oligo
Cancer
Cancer
12.9 years ago
Richard Friedman
★ 2.0k
0
votes
6
replies
7.3k
views
DeSeq vs current version of Cuffdiff
Sequencing
Bayesian
Cancer
DESeq
Sequencing
Bayesian
Cancer
DESeq
updated 12.9 years ago by
Stephen Turner
▴ 290 • written 12.9 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
4.6k
views
Comment:
C: PCA to remove batch effect.
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
4.6k
views
Comment:
C: PCA to remove batch effect.
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
4.6k
views
Answer:
A: PCA to remove batch effect.
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.1k
views
Answer:
A: some basic questions
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.0k
views
Answer:
A: some basic questions
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.2k
views
Comment:
C: which statistical test to perform?
13.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
2.0k
views
Comment:
C: objective criterion for identification of outlying arrays by pca
13.2 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.0k
views
Comment:
C: objective criterion for identification of outlying arrays by pca
13.2 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.0k
views
Comment:
C: objective criterion for identification of outlying arrays by pca
13.2 years ago
Richard Friedman
★ 2.0k
0
votes
10
replies
2.0k
views
objective criterion for identification of outlying arrays by pca
Bayesian
Cancer
Bayesian
Cancer
updated 13.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 13.2 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
1.3k
views
Comment:
C: Practical utilization of SQN in ST1.0 Gene normalization.
13.2 years ago
Richard Friedman
★ 2.0k
0
votes
3
replies
1.3k
views
Practical utilization of SQN in ST1.0 Gene normalization.
Bayesian
Cancer
oligo
Bayesian
Cancer
oligo
updated 13.2 years ago by
Tim Triche
★ 4.2k • written 13.2 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
1.6k
views
NUSE and RLE PLOTS for ST1.0 Gene chips with oligo w/o 1st quantile line
Bayesian
Cancer
oligo
Bayesian
Cancer
oligo
13.2 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.3k
views
Answer:
A: affylmGUI annotations
13.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.3k
views
Pathway specific gene lists in SPIA
Bayesian
Cancer
Bayesian
Cancer
13.5 years ago
Richard Friedman
★ 2.0k
3
votes
0
replies
3.0k
views
Evidence-based guidelines for use the method="robust" option in lmFit
Microarray
Normalization
Bayesian
Regression
Cancer
limma
Microarray
Normalization
Cancer
13.6 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
3.0k
views
Comment:
C: Delta CT data distribution and cluster analyses; machine learning or other
13.6 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
3.0k
views
Answer:
A: Delta CT data distribution and cluster analyses; machine learning or other
13.7 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
3.0k
views
Answer:
A: Delta CT data distribution and cluster analyses; machine learning or other
13.7 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.6k
views
Comment:
C: Detection calls and LIMMA
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
3
replies
1.6k
views
Comment:
C: Detection calls and LIMMA
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.6k
views
Answer:
A: Detection calls and LIMMA
13.8 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.1k
views
st 1.0 gene quality measures
Cancer
Cancer
updated 13.9 years ago by
Davis, Wade
▴ 350 • written 13.9 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
1.1k
views
transformation for illumina methylation beta data prior to input to limma
Cancer
limma
Cancer
limma
updated 13.9 years ago by
Sean Davis
21k • written 13.9 years ago by
Richard Friedman
★ 2.0k
0
votes
1
reply
2.4k
views
Answer:
A: limma report logFC confidence interval?
13.9 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
731
views
Application of Method of Aryee et al to Illumina methylation Arrays
Microarray
Cancer
Microarray
Cancer
14.0 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.0k
views
Answer:
A: booklet on using R for biomedical statistics
14.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
2.2k
views
Comment:
C: oneChannelGUI
14.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
2.2k
views
Comment:
C: oneChannelGUI
14.1 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.2k
views
Comment:
C: oneChannelGUI
14.1 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.2k
views
Answer:
A: oneChannelGUI
14.1 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
663
views
Answer:
A: help with normalization
14.3 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
912
views
Answer:
A: AgiMicroRna rmaMicriRna call fails
14.3 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.4k
views
Answer:
A: AgiMicroRna and readMicroRnaFE
14.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.4k
views
Comment:
C: How to normalize one additional CEL file?
14.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
1.1k
views
Answer:
A: package for pathway analysis
14.4 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
2.1k
views
Comment:
C: AgiMicroRNA and Extra columns in Agilent Mouse miRNA Microarray Release 12.0 G44
14.5 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
2.1k
views
Comment:
C: AgiMicroRNA and Extra columns in Agilent Mouse miRNA Microarray Release 12.0 G44
14.5 years ago
Richard Friedman
★ 2.0k
0
votes
3
replies
1.7k
views
identical output plots for NUSE AND RLE
GO
Cancer
affyPLM
GO
Cancer
affyPLM
updated 14.5 years ago by
Paolo Innocenti
▴ 320 • written 14.5 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
1.7k
views
Comment:
C: identical output plots for NUSE AND RLE
14.5 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.2k
views
Error message with rmaMicroRna on mouse data in AgiMicroRNA
Cancer
probe
AgiMicroRna
Cancer
probe
AgiMicroRna
updated 14.6 years ago by
Pedro López Romero
▴ 360 • written 14.6 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
882
views
Error in cvArray in AgiMicroRNA
Cancer
probe
Cancer
probe
14.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
838
views
mvaPlots of RMA normalized data in AgiMicroRNA
Cancer
AgiMicroRna
Cancer
AgiMicroRna
14.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
643
views
Error Message upon filtering in AgiMicroRNA of RMA normalized object.
Cancer
Cancer
14.6 years ago
Richard Friedman
★ 2.0k
0
votes
2
replies
949
views
Error message with rmaMicroRna on mouse data in AgiMicroRNA
Cancer
probe
Cancer
probe
updated 14.6 years ago by
Pedro López Romero
▴ 360 • written 14.6 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
682
views
Answer:
A: Questions about calculate gene signal
14.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
2.1k
views
Answer:
A: AgiMicroRNA and Extra columns in Agilent Mouse miRNA Microarray Release 12.0 G44
14.6 years ago
Richard Friedman
★ 2.0k
200 results • Page
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