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Comment: Comment: Learning DiffBind - some basic questions
3.9 years ago Rory Stark ★ 5.2k
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2.2k
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Answer: Answer: Learning DiffBind - some basic questions
3.9 years ago Rory Stark ★ 5.2k
2
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0
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1.1k
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Answer: Answer: Bewildering PCA plot at DiffBind
3.9 years ago Rory Stark ★ 5.2k
0
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1
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2.2k
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Comment: Comment: Error report when loading a 0-byte bed file for DBA object in Diffbind
4.0 years ago Rory Stark ★ 5.2k
0
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1
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2.5k
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Answer: Answer: Cut&Run normalization for Diffbind and DESeq2
4.0 years ago Rory Stark ★ 5.2k
1
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1
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2.5k
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Answer: Answer: Cut&Run normalization for Diffbind and DESeq2
4.0 years ago Rory Stark ★ 5.2k
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0
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807
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Comment: Comment: Venn diagram of peaks between three tissue types using DiffBind
4.0 years ago Rory Stark ★ 5.2k
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0
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3.3k
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Comment: Comment: Normalization in DiffBind for Atac-seq
4.0 years ago Rory Stark ★ 5.2k
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2
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3.3k
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Answer: Answer: Questions about DiffBind loaded peaks and re-count reads
4.0 years ago Rory Stark ★ 5.2k
0
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1
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1.0k
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Comment: Comment: CHIP Seq Analysis by DiffBind Package
4.0 years ago Rory Stark ★ 5.2k
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1
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2.3k
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Comment: Comment: DiffBind is losing peaks
4.0 years ago Rory Stark ★ 5.2k
1
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0
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3.0k
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Answer: Answer: Interaction with DESeq2 via DiffBind
4.0 years ago Rory Stark ★ 5.2k
2
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1
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3.3k
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Answer: Answer: Normalization in DiffBind for Atac-seq
4.0 years ago Rory Stark ★ 5.2k
0
votes
1
reply
807
views
Answer: Answer: Venn diagram of peaks between three tissue types using DiffBind
4.0 years ago Rory Stark ★ 5.2k
1
vote
0
replies
3.0k
views
Answer: Answer: Interaction with DESeq2 via DiffBind
4.0 years ago Rory Stark ★ 5.2k
0
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1
reply
2.2k
views
Answer: Answer: Error report when loading a 0-byte bed file for DBA object in Diffbind
4.0 years ago Rory Stark ★ 5.2k
0
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1
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2.2k
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Comment: Comment: Error report when using dab() in Diffbind
4.0 years ago Rory Stark ★ 5.2k
0
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0
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3.3k
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Answer: Answer: Questions about DiffBind loaded peaks and re-count reads
4.0 years ago Rory Stark ★ 5.2k
0
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1
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1.4k
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Answer: Answer: DiffBind Error When using dba.count()
4.0 years ago Rory Stark ★ 5.2k
0
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0
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3.3k
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Answer: Answer: Questions about DiffBind loaded peaks and re-count reads
4.0 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.0k
views
Answer: Answer: CHIP Seq Analysis by DiffBind Package
4.0 years ago Rory Stark ★ 5.2k
0
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1
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1.7k
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Comment: Comment: DiffBind:all samples have 0 counts for all genes.
4.0 years ago Rory Stark ★ 5.2k
0
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1
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2.2k
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Comment: Comment: Error report when using dab() in Diffbind
4.0 years ago Rory Stark ★ 5.2k
0
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1
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1.7k
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Answer: Answer: DiffBind:all samples have 0 counts for all genes.
4.0 years ago Rory Stark ★ 5.2k
0
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1
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1.0k
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Answer: Answer: DiffBind reporting error
4.0 years ago Rory Stark ★ 5.2k
0
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1
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2.2k
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Comment: Comment: Error report when using dab() in Diffbind
4.0 years ago Rory Stark ★ 5.2k
0
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1
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2.2k
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Comment: Comment: Error report when using dab() in Diffbind
4.1 years ago Rory Stark ★ 5.2k
0
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1
reply
2.3k
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Comment: Comment: DiffBind is losing peaks
4.1 years ago Rory Stark ★ 5.2k
0
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1
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2.3k
views
Comment: Comment: DiffBind is losing peaks
4.1 years ago Rory Stark ★ 5.2k
0
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1
reply
2.2k
views
Answer: Answer: Error report when using dab() in Diffbind
4.1 years ago Rory Stark ★ 5.2k
1
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1
reply
2.3k
views
Answer: Answer: DiffBind is losing peaks
4.1 years ago Rory Stark ★ 5.2k
0
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0
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1.2k
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Answer: Answer: Is it possible in DiffBind to specify sizeFactors for DESeq2 analysis?
4.1 years ago Rory Stark ★ 5.2k
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0
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1.2k
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Answer: Answer: DiffBind PE data
4.1 years ago Rory Stark ★ 5.2k
0
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0
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2.0k
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Answer: Answer: Multi-factor blocking in DiffBind
4.1 years ago Rory Stark ★ 5.2k
2
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1
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3.0k
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Answer: Answer: Interaction with DESeq2 via DiffBind
4.1 years ago Rory Stark ★ 5.2k
0
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0
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1.7k
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Answer: Answer: Is there a way to run Diffbind without the normalization ?
4.1 years ago Rory Stark ★ 5.2k
0
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0
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1.8k
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Answer: Answer: DiffBind with highly variable FRiP (Fraction Reads in Peaks)
4.1 years ago Rory Stark ★ 5.2k
0
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0
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1.3k
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Answer: Answer: how to get the estimated libSize in DiffBind
4.1 years ago Rory Stark ★ 5.2k
0
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0
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861
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Comment: Comment: Can I completely repeat the DiffBind results using DESeq2?
4.1 years ago Rory Stark ★ 5.2k
0
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0
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986
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Comment: Comment: Using multiple covariates in DIffBind
4.1 years ago Rory Stark ★ 5.2k
0
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0
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2.3k
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Answer: Answer: MAnorm output as DiffBind input.
4.1 years ago Rory Stark ★ 5.2k
1
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0
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2.0k
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Answer: Answer: Integrating the computed spike-in coefficients for the normalisation before diff
4.1 years ago Rory Stark ★ 5.2k
0
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0
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1.6k
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Comment: Comment: Diffbind multiple blocking factor
4.1 years ago Rory Stark ★ 5.2k
0
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0
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1.2k
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Comment: Comment: Diffbind multiple groups
4.1 years ago Rory Stark ★ 5.2k
1
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0
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1.2k
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Comment: Comment: Diffbind for regressing multiple confounding variables (blocking factors)
4.1 years ago Rory Stark ★ 5.2k
0
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0
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876
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Answer: Answer: DiffBind custom normalization factor
4.1 years ago Rory Stark ★ 5.2k
0
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0
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1.1k
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Comment: Comment: Diffbind with multiple blocking factors
4.1 years ago Rory Stark ★ 5.2k
0
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0
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3.2k
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Answer: Answer: Downsampling ChIP-seq BAM files with spike in normalization factor before feedin
4.1 years ago Rory Stark ★ 5.2k
0
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1
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1.3k
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Comment: Comment: Extended submission deadline for EuroBioc2020
4.1 years ago Rory Stark ★ 5.2k
1
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1
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1.8k
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News: Extensive updates in DiffBind 3.0
Normalization ATACSeq ChIPSeq DiffBind chipseq
written 4.1 years ago by ★ 5.2k
931 results • Page 7 of 19
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