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Comment: Comment: Assymetric MA plot with no overall trend
3 days ago Michael Love 42k
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496
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Comment: Comment: Can I trust the differential expression analysis when the two groups overlap on
4 days ago Michael Love 42k
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496
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Comment: Comment: Can I trust the differential expression analysis when the two groups overlap on
4 days ago Michael Love 42k
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236
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Comment: Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
4 days ago Michael Love 42k
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
4 days ago Michael Love 42k
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1
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
5 days ago Michael Love 42k
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
8 days ago Michael Love 42k
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1
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
9 days ago Michael Love 42k
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
9 days ago Michael Love 42k
0
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1
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
10 days ago Michael Love 42k
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1
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
12 days ago Michael Love 42k
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1
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
12 days ago Michael Love 42k
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227
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Comment: Comment: Couldn't connect to server while using "pathways"
12 days ago Michael Love 42k
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
13 days ago Michael Love 42k
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1
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3.1k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
13 days ago Michael Love 42k
1
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254
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Comment: Comment: Too many significant genes when integrating gtex and tcga
15 days ago Michael Love 42k
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302
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Comment: Comment: log2FoldChange value is way too different when compared with counts(dds)
17 days ago Michael Love 42k
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2.6k
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Comment: Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
18 days ago Michael Love 42k
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236
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Comment: Comment: Different Shrunk Log2FC according with reference
24 days ago Michael Love 42k
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1
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2.6k
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Comment: Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
25 days ago Michael Love 42k
1
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251
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Comment: Comment: DESeq2 - dispersion estimation when there is none
25 days ago Michael Love 42k
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449
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Comment: Comment: DESeq filtering specific to contrasts
29 days ago Michael Love 42k
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794
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Comment: Comment: DESeq2 setting significant p-value
29 days ago Michael Love 42k
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1
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449
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Comment: Comment: DESeq filtering specific to contrasts
29 days ago Michael Love 42k
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1
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1.7k
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Comment: Comment: Which input file is used for DGEList in EgdeR?
29 days ago Michael Love 42k
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1
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2.6k
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Comment: Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
29 days ago Michael Love 42k
0
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0
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292
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Comment: Comment: DEG with low counts
29 days ago Michael Love 42k
0
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1
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449
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Comment: Comment: DESeq filtering specific to contrasts
29 days ago Michael Love 42k
0
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1
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794
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Comment: Comment: DESeq2 setting significant p-value
4 weeks ago Michael Love 42k
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631
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Comment: Comment: How to correct for known and surrogate variables in DESeq2?
4 weeks ago Michael Love 42k
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0
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230
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Comment: Comment: Interaction Terms in DESeq2 - Shrinkage
4 weeks ago Michael Love 42k
1
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1
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1.7k
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Comment: Comment: Which input file is used for DGEList in EgdeR?
5 weeks ago Michael Love 42k
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246
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Comment: Comment: Interaction term vs grouping variable design considerations
5 weeks ago Michael Love 42k
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459
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Comment: Comment: DESeq2 step-by-step Normalization then DGE separately & Normalization methods an
6 weeks ago Michael Love 42k
0
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1
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2.6k
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Comment: Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
6 weeks ago Michael Love 42k
0
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2
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2.6k
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Comment: Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
6 weeks ago Michael Love 42k
0
votes
1
reply
2.6k
views
Comment: Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
6 weeks ago Michael Love 42k
1
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1
reply
459
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Comment: Comment: DESeq2 step-by-step Normalization then DGE separately & Normalization methods an
6 weeks ago Michael Love 42k
0
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0
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286
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Comment: Comment: Abnormal Low Dispersion Gene Population in DESeq2
6 weeks ago Michael Love 42k
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1
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372
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Comment: Comment: Doing comparison of RNA-seq data using EdgeR
7 weeks ago Michael Love 42k
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216
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Comment: Comment: Clarification on Library Size Normalization After Using tximport with countsFrom
7 weeks ago Michael Love 42k
1
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0
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313
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Comment: Comment: DESeq2 - Plot Nr. Genes vs Variance explained in PCA
8 weeks ago Michael Love 42k
1
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0
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737
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Comment: Comment: DESeq2 unable to handle large count values
8 weeks ago Michael Love 42k
0
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0
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433
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Comment: Comment: DESeq2: subtract effect of an isotope control before comparing to a baseline sam
9 weeks ago Michael Love 42k
0
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0
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459
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Comment: Comment: DESeq2 filtering vs edgeR filtering
9 weeks ago Michael Love 42k
1
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1
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1.2k
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Comment: Comment: Adding cell population estimates as a covariate in DESeq2 differential gene expr
9 weeks ago Michael Love 42k
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0
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456
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Comment: Comment: DESeq and SVA for batch effect
10 weeks ago Michael Love 42k
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0
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670
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Comment: Comment: DESEQ Inquiry
10 weeks ago Michael Love 42k
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725
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Comment: Comment: Unexpected behavior of lfcShrink() function in DESeq2 analysis
11 weeks ago Michael Love 42k
0
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1
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725
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Comment: Comment: Unexpected behavior of lfcShrink() function in DESeq2 analysis
11 weeks ago Michael Love 42k
4,235 results • Page 1 of 85
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