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Comment: Comment: vst transformation and zero counts
10 weeks ago Michael Love 41k
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1
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1.1k
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Comment: Comment: How to calculate p value when comparing two sets of DEGs and not applying intera
10 weeks ago Michael Love 41k
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1
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1.4k
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Comment: Comment: Normalizing Salmon output count data matrix using DESeq2
10 weeks ago Michael Love 41k
0
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1
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2.7k
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Comment: Comment: DESeq2::sizeFactors() function does not output the sizeFactor table.
10 weeks ago Michael Love 41k
0
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0
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402
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Comment: Comment: DESeq2: Adjust for treatment effect patient vs control
10 weeks ago Michael Love 41k
0
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0
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427
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Comment: Comment: DESEQ2 Repeated Measures-like design error help
10 weeks ago Michael Love 41k
0
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1
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427
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Comment: Comment: DESEQ2 Repeated Measures-like design error help
12 weeks ago Michael Love 41k
0
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0
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256
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Comment: Comment: DESeq2 interaction terms RIPseq analysis
12 weeks ago Michael Love 41k
0
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1
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456
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Comment: Comment: DESeq2 aborting after upgrade
3 months ago Michael Love 41k
0
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0
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372
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Comment: Comment: LOG2FC DESEQ2
3 months ago Michael Love 41k
0
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0
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397
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Comment: Comment: Big differences between biological replicates makes DESeq2 result 0
3 months ago Michael Love 41k
0
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0
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306
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Comment: Comment: Interaction tests and paired interaction tests in swish
3 months ago Michael Love 41k
0
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0
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337
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Comment: Comment: Deleting a column from data frame and then running DESeq2
3 months ago Michael Love 41k
0
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0
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586
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Comment: Comment: DESeq2 design with multiple factors
3 months ago Michael Love 41k
0
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0
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273
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Comment: Comment: DESeq2 multi-factor design and interaction terms
3 months ago Michael Love 41k
1
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1
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516
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Comment: Comment: distanceToNearest
3 months ago Michael Love 41k
0
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0
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918
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Comment: Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
4 months ago Michael Love 41k
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0
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470
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Comment: Comment: DESeq2: Difference in DEG numbers when switching reference condition (numerator,
4 months ago Michael Love 41k
0
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0
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517
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Comment: Comment: Different genes expression with limma
4 months ago Michael Love 41k
0
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1
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918
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Comment: Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
4 months ago Michael Love 41k
0
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1
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918
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Comment: Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
4 months ago Michael Love 41k
0
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0
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2.4k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
5 months ago Michael Love 41k
0
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1
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2.4k
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Comment: Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
5 months ago Michael Love 41k
1
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0
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474
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Comment: Comment: DESeq2 estimateSizeFactors iterate takes too long
5 months ago Michael Love 41k
0
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0
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676
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Comment: Comment: Unable to replicate figures of CBCS data after nSolver and RUVSeq normalization
5 months ago Michael Love 41k
1
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1
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700
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Comment: Comment: DESeq2 unable to handle large count values
5 months ago Michael Love 41k
0
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0
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930
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Comment: Comment: SparseArray unable to install on Bioc 3.18
5 months ago Michael Love 41k
0
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1
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930
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Comment: Comment: SparseArray unable to install on Bioc 3.18
5 months ago Michael Love 41k
0
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1
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930
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Comment: Comment: SparseArray unable to install on Bioc 3.18
6 months ago Michael Love 41k
0
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0
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552
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Comment: Comment: rnaSeqGene workflow not available in Bioconductor 3.18
6 months ago Michael Love 41k
0
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1
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821
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Comment: Comment: Quickly calculating adjusted Fold Change with DESeq2
6 months ago Michael Love 41k
0
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0
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429
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Comment: Comment: Tximport Error - transcripts in quant files are not the same as tx2gene
6 months ago Michael Love 41k
1
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0
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867
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Comment: Comment: DESeq2: Design model includes sex but only one female
6 months ago Michael Love 41k
0
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0
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1.0k
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Comment: Comment: DESeq2 gene length normalisation
6 months ago Michael Love 41k
1
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0
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3.2k
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Comment: Comment: DESeq2 - Differences between plotCounts and normalized counts
6 months ago Michael Love 41k
0
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1
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1.0k
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Comment: Comment: DESeq2 gene length normalisation
6 months ago Michael Love 41k
0
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0
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48k
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Comment: Comment: deseq2 filter the low counts
6 months ago Michael Love 41k
0
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1
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1.5k
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Comment: Comment: Questions about the false positives indicated by DESeq2 and QQ plot
6 months ago Michael Love 41k
0
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1
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712
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Comment: Comment: DESeq2 : standardising variation between treatments
6 months ago Michael Love 41k
0
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0
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1.5k
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Comment: Comment: deseq2 pre filter rna seq
6 months ago Michael Love 41k
3
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3
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1.9k
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Comment: Comment: tximport error: vroom
7 months ago Michael Love 41k
1
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0
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640
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Comment: Comment: Mixed up sample info with plotPCA
7 months ago Michael Love 41k
0
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1
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640
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Comment: Comment: Mixed up sample info with plotPCA
7 months ago Michael Love 41k
1
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1
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687
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Comment: Comment: Deseq2 calculated log2foldchange not consistent with RPM in IP-small RNA-seq
7 months ago Michael Love 41k
0
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0
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800
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Comment: Comment: collapseReplicates error after tximeta
7 months ago Michael Love 41k
0
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0
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1.4k
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Comment: Comment: Does countsFromAbundance="lengthScaledTPM" produce un-normalized counts?
7 months ago Michael Love 41k
0
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1
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1.4k
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Comment: Comment: Does countsFromAbundance="lengthScaledTPM" produce un-normalized counts?
7 months ago Michael Love 41k
0
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1
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1.4k
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Comment: Comment: Does countsFromAbundance="lengthScaledTPM" produce un-normalized counts?
7 months ago Michael Love 41k
1
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1
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1.4k
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Comment: Comment: Does countsFromAbundance="lengthScaledTPM" produce un-normalized counts?
7 months ago Michael Love 41k
2
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0
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1.2k
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Comment: Comment: Differential expression analysis with only FPKM matrix available from total newb
7 months ago Michael Love 41k
4,222 results • Page 2 of 85
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