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Comment: C: makeTranscriptDbFromGFF fails on NCBI Bacteria genomes
11.0 years ago Malcolm Cook ★ 1.6k
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Answer: A: makeTranscriptDbFromGFF fails on NCBI Bacteria genomes
11.0 years ago Malcolm Cook ★ 1.6k
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Comment: C: advantages of annotation packages
11.0 years ago Malcolm Cook ★ 1.6k
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1.2k
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Comment: C: Limit on number of sequence files for forging a BSgenome
11.1 years ago Malcolm Cook ★ 1.6k
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1.3k
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Comment: C: [Rd] enabling reproducible research & R package management & install.package.ver
11.2 years ago Malcolm Cook ★ 1.6k
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Answer: A: [Rd] enabling reproducible research & R package management & install.package.ver
11.2 years ago Malcolm Cook ★ 1.6k
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5
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1.3k
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[Rd] enabling reproducible research & R package management & install.package.version & BiocLite
GO GO
11.2 years ago Malcolm Cook ★ 1.6k
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1.7k
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Comment: C: enabling reproducible research & R package management & install.package.version
11.2 years ago Malcolm Cook ★ 1.6k
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5
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1.7k
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enabling reproducible research & R package management & install.package.version & BiocLite
updated 11.2 years ago by ▴ 170 • written 11.2 years ago by ★ 1.6k
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emacs org mode html export using jQuery DataTables (WAS: new package for generating interactive HTML reports)
Network limma GOstats GSEAlm edgeR ReportingTools Network limma GOstats GSEAlm edgeR
11.4 years ago Malcolm Cook ★ 1.6k
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Answer: A: new package for generating interactive HTML reports
11.4 years ago Malcolm Cook ★ 1.6k
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2.3k
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Comment: C: new package for generating interactive HTML reports
11.4 years ago Malcolm Cook ★ 1.6k
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12k
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Answer: A: subset GRanges
11.4 years ago Malcolm Cook ★ 1.6k
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Comment: C: countMatches() (was: table for GenomicRanges)
11.4 years ago Malcolm Cook ★ 1.6k
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2.5k
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Comment: C: countMatches() (was: table for GenomicRanges)
11.4 years ago Malcolm Cook ★ 1.6k
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2.5k
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Comment: C: countMatches() (was: table for GenomicRanges)
11.4 years ago Malcolm Cook ★ 1.6k
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2.5k
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Comment: C: countMatches() (was: table for GenomicRanges)
11.4 years ago Malcolm Cook ★ 1.6k
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4.3k
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Comment: C: Exclude overlapping intervals
11.4 years ago Malcolm Cook ★ 1.6k
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1
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4.3k
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Comment: C: Exclude overlapping intervals
11.4 years ago Malcolm Cook ★ 1.6k
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2.0k
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Comment: C: IRanges/List oddity: do.call of `c` on a list of IRangesList returns "list" only
11.4 years ago Malcolm Cook ★ 1.6k
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2.0k
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Comment: C: IRanges/List oddity: do.call of `c` on a list of IRangesList returns "list" only
11.4 years ago Malcolm Cook ★ 1.6k
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4.3k
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Comment: C: Exclude overlapping intervals
11.4 years ago Malcolm Cook ★ 1.6k
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1
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2.0k
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Comment: C: IRanges/List oddity: do.call of `c` on a list of IRangesList returns "list" only
11.5 years ago Malcolm Cook ★ 1.6k
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536
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IRanges/List oddity: do.call of `c` on a list of IRangesList returns "list" only when the list is named
11.5 years ago Malcolm Cook ★ 1.6k
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1.1k
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Answer: A: pooling for parallel hierarchical operations
11.5 years ago Malcolm Cook ★ 1.6k
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1
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1.3k
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Comment: C: bug in pintersect in GenomicRanges
11.5 years ago Malcolm Cook ★ 1.6k
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1.7k
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Answer: A: getting masked sequence from BSgenome: can I use Views or getSeq?
11.5 years ago Malcolm Cook ★ 1.6k
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658
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[Bioc-devel] knowing what is changed/new in release patches
IRanges IRanges
11.5 years ago Malcolm Cook ★ 1.6k
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4
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730
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knowing what is changed/new in release patches
IRanges IRanges
updated 11.5 years ago by ★ 6.5k • written 11.5 years ago by ★ 1.6k
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730
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Comment: C: knowing what is changed/new in release patches
11.5 years ago Malcolm Cook ★ 1.6k
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1
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3.0k
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Comment: C: GenomicRanges::nearest (especially follow)
11.6 years ago Malcolm Cook ★ 1.6k
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1.5k
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Comment: C: Error in makeTranscriptDbFromBiomart
11.6 years ago Malcolm Cook ★ 1.6k
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1.5k
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Answer: A: Error in makeTranscriptDbFromBiomart
11.6 years ago Malcolm Cook ★ 1.6k
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732
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Comment: C: multicore and GRangesList [Resurrected]
11.7 years ago Malcolm Cook ★ 1.6k
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732
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Comment: C: multicore and GRangesList [Resurrected]
11.7 years ago Malcolm Cook ★ 1.6k
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4
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732
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multicore and GRangesList [Resurrected]
updated 11.7 years ago by 25k • written 11.7 years ago by ★ 1.6k
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647
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Comment: C: transcriptLocs2refLocs Bug when strand is negative
11.7 years ago Malcolm Cook ★ 1.6k
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853
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Comment: C: BUG in Genomic(Features|Ranges): names(unlist(transcriptsBy(txdb, 'gene'))) is U
11.7 years ago Malcolm Cook ★ 1.6k
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2
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647
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transcriptLocs2refLocs Bug when strand is negative
updated 11.7 years ago by 25k • written 11.7 years ago by ★ 1.6k
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4
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853
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BUG in Genomic(Features|Ranges): names(unlist(transcriptsBy(txdb, 'gene'))) is UNRELIABLE!!!
GenomicRanges GenomicRanges
updated 11.7 years ago by 25k • written 11.7 years ago by ★ 1.6k
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Comment: C: nearest() for GRanges
11.9 years ago Malcolm Cook ★ 1.6k
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2.0k
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Comment: C: nearest() for GRanges
11.9 years ago Malcolm Cook ★ 1.6k
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2.0k
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Comment: C: nearest() for GRanges
11.9 years ago Malcolm Cook ★ 1.6k
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2.0k
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Comment: C: nearest() for GRanges
11.9 years ago Malcolm Cook ★ 1.6k
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[Engineers for ensemblgenomes.org #251937] BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info …
Drosophila melanogaster TranscriptDb biomaRt GenomicFeatures genomes Drosophila melanogaster
11.9 years ago Malcolm Cook ★ 1.6k
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2.0k
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Comment: C: nearest() for GRanges
11.9 years ago Malcolm Cook ★ 1.6k
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2.9k
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Comment: C: Getting the start and end positions of a list of genes
11.9 years ago Malcolm Cook ★ 1.6k
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1
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1.4k
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Comment: C: SRAdb: is the database missing some entries?
11.9 years ago Malcolm Cook ★ 1.6k
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Comment: C: rtracklayer proposal for ISSUE: import.gff3 asRangedData=FALSE fails when strand
12.1 years ago Malcolm Cook ★ 1.6k
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3
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1.1k
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rtracklayer proposal for ISSUE: import.gff3 asRangedData=FALSE fails when strand is '.'
updated 12.1 years ago by 16k • written 12.1 years ago by ★ 1.6k
191 results • Page 3 of 4
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