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Comment: C: normalization with mas5
10.6 years ago Stephen Piccolo ▴ 600
2
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Answer: A: normalization with mas5
10.6 years ago Stephen Piccolo ▴ 600
0
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1
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Comment: C: Can I feed TCGA normalized count data to EdgeR for differential gene expression
10.7 years ago Stephen Piccolo ▴ 600
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Comment: C: Can I feed TCGA normalized count data to EdgeR for differential gene expression
10.7 years ago Stephen Piccolo ▴ 600
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Comment: C: Filtering out lowly expressed genes on Affymetrix Gene ST arrays
10.7 years ago Stephen Piccolo ▴ 600
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Comment: C: Can I feed TCGA normalized count data to EdgeR for differential gene expression
10.7 years ago Stephen Piccolo ▴ 600
0
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Comment: C: Possible ways of performing non-specific intensity filtering on Perfect-match on
10.8 years ago Stephen Piccolo ▴ 600
0
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1
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3.8k
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Comment: C: Possible ways of performing non-specific intensity filtering on Perfect-match on
10.8 years ago Stephen Piccolo ▴ 600
0
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1
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3.8k
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Comment: C: Possible ways of performing non-specific intensity filtering on Perfect-match on
10.8 years ago Stephen Piccolo ▴ 600
0
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0
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3.8k
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Comment: C: Possible ways of performing non-specific intensity filtering on Perfect-match on
10.8 years ago Stephen Piccolo ▴ 600
0
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1
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3.8k
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Comment: C: Possible ways of performing non-specific intensity filtering on Perfect-match on
10.8 years ago Stephen Piccolo ▴ 600
1
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1
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3.8k
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Comment: C: Possible ways of performing non-specific intensity filtering on Perfect-match on
10.8 years ago Stephen Piccolo ▴ 600
1
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1
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3.8k
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Answer: A: Possible ways of performing non-specific intensity filtering on Perfect-match on
10.8 years ago Stephen Piccolo ▴ 600
0
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2.0k
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Comment: C: UPC and Sequence file to remove GC bias
10.8 years ago Stephen Piccolo ▴ 600
0
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1
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2.0k
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Answer: A: UPC and Sequence file to remove GC bias
10.8 years ago Stephen Piccolo ▴ 600
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2.0k
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Comment: C: SCAN UPC normalisation
10.8 years ago Stephen Piccolo ▴ 600
1
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6.1k
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Comment: C: How to use brainarray custom cdf with any bioconductor package?
10.8 years ago Stephen Piccolo ▴ 600
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6.1k
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Comment: C: How to use brainarray custom cdf with any bioconductor package?
10.8 years ago Stephen Piccolo ▴ 600
0
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1
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6.1k
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Comment: C: How to use brainarray custom cdf with any bioconductor package?
10.8 years ago Stephen Piccolo ▴ 600
1
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2.0k
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Answer: A: SCAN UPC normalisation
10.9 years ago Stephen Piccolo ▴ 600
0
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0
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16k
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Comment: C: Can I feed TCGA normalized count data to EdgeR for differential gene expression
10.9 years ago Stephen Piccolo ▴ 600
4
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3
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16k
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Answer: A: Can I feed TCGA normalized count data to EdgeR for differential gene expression
10.9 years ago Stephen Piccolo ▴ 600
0
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2
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4.1k
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Comment: C: GeneChip Human Transcriptome Array 2.0 analysis in R for identifying possible di
updated 10.9 years ago by 25k • written 10.9 years ago by ▴ 600
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1.5k
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Answer: A: SCAN.UPC for Agilent single channel and Illumina
11.0 years ago Stephen Piccolo ▴ 600
0
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1
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3.7k
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Comment: C: frma vectors for GPL13158 (Affymetrix HT HG-U133+ PM Array Plate)?
11.0 years ago Stephen Piccolo ▴ 600
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Comment: C: Questions about analysis of GeneChip Rat Gene 2.0 ST Array
11.0 years ago Stephen Piccolo ▴ 600
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3.7k
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Comment: C: SCAN.UPC: exception thrown when loading GEOQuery
11.1 years ago Stephen Piccolo ▴ 600
0
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1
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6.1k
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Answer: A: How to use brainarray custom cdf with any bioconductor package?
11.2 years ago Stephen Piccolo ▴ 600
0
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2.1k
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Answer: A: how to normalize mogene 2.1 st array?
11.2 years ago Stephen Piccolo ▴ 600
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4.1k
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Comment: C: Normalizing Expressionset Exprs without Raw CEL files
11.3 years ago Stephen Piccolo ▴ 600
0
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1
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4.1k
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Comment: C: Normalizing Expressionset Exprs without Raw CEL files
11.3 years ago Stephen Piccolo ▴ 600
0
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1
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4.1k
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Answer: A: Normalizing Expressionset Exprs without Raw CEL files
11.3 years ago Stephen Piccolo ▴ 600
0
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1
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2.2k
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Filtering pmSequence based on probe target level for HTA 2.0 arrays
Annotation probe oligo Annotation probe oligo
updated 11.5 years ago by 68k • written 11.5 years ago by ▴ 600
0
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1
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2.4k
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Comment: C: SCAN.UPC for microarray and RNAseq data
11.6 years ago Stephen Piccolo ▴ 600
0
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1
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2.4k
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Comment: C: SCAN.UPC for microarray and RNAseq data
11.6 years ago Stephen Piccolo ▴ 600
0
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1
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2.4k
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Answer: A: SCAN.UPC for microarray and RNAseq data
11.6 years ago Stephen Piccolo ▴ 600
0
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1.1k
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FYI: SCAN.UPC and HuGene 1/2 arrays
SCAN.UPC SCAN.UPC
11.6 years ago Stephen Piccolo ▴ 600
0
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1
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1.6k
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Duplicate probe coordinates with pd.hugene.2.1.st and oligo
probe affy PROcess oligo probe affy PROcess oligo
updated 11.7 years ago by 68k • written 11.7 years ago by ▴ 600
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1.6k
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Answer: A: Normalising both Affy mogene 1.0 and 1.1 together
11.7 years ago Stephen Piccolo ▴ 600
0
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1
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1.5k
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oligo package - Unable to read HT-U133A CEL files
affy oligo affy oligo
updated 11.7 years ago by ★ 4.3k • written 11.8 years ago by ▴ 600
0
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2.0k
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Answer: A: Comparison of murine and human microarray data
11.8 years ago Stephen Piccolo ▴ 600
0
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0
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2.0k
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Answer: A: Memory problem with rma()
12.0 years ago Stephen Piccolo ▴ 600
0
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0
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3.1k
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Comment: C: using frma and brainarray cdf on exon arrays
12.1 years ago Stephen Piccolo ▴ 600
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1
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3.1k
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Comment: C: using frma and brainarray cdf on exon arrays
12.1 years ago Stephen Piccolo ▴ 600
0
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1
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3.1k
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Answer: A: using frma and brainarray cdf on exon arrays
12.1 years ago Stephen Piccolo ▴ 600
0
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2
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2.4k
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Answer: A: SCAN.UPC for Illumina arrays?
12.2 years ago Stephen Piccolo ▴ 600
0
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0
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2.2k
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Comment: C: help with SCAN.UPC and u133aaofav2
12.3 years ago Stephen Piccolo ▴ 600
0
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1
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2.2k
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Answer: A: help with SCAN.UPC and u133aaofav2
12.3 years ago Stephen Piccolo ▴ 600
0
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1
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1.9k
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Answer: A: SCAN.UPC vs NUSE
12.4 years ago Stephen Piccolo ▴ 600
0
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1
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1.9k
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SCAN-UPC: 12079 of 22283 probes returned for hgu133a CELs?
Normalization hgu133a probe affy PROcess SCAN.UPC Normalization hgu133a probe affy
updated 12.7 years ago by ▴ 20 • written 12.7 years ago by ▴ 600
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