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Answer: Answer: SGSeq: moving toward diffex from SGSeq analysis
10 days ago Leonard Goldstein ▴ 200
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Email address change on bioconductor support site
bioconductor
updated 3.6 years ago by ▴ 50 • written 3.6 years ago by ▴ 200
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Answer: A: How should I handle read counts derived from SGSeq when they were passed to limm
3.6 years ago Leonard Goldstein ▴ 200
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Comment: C: Issues with SGSeq: analyzeFeatures() returns errors on BAM files
4.4 years ago Leonard Goldstein ▴ 200
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722
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Answer: A: Extract sample information from own BAM files using SGSeq
4.4 years ago Leonard Goldstein ▴ 200
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889
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Comment: C: Custom gene annotations for SGSeq
4.5 years ago Leonard Goldstein ▴ 200
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Answer: A: Custom gene annotations for SGSeq
4.5 years ago Leonard Goldstein ▴ 200
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Comment: C: using only uniquely-mapping reads for alternative splicing using SGSeq
4.6 years ago Leonard Goldstein ▴ 200
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Answer: A: using only uniquely-mapping reads for alternative splicing using SGSeq
4.6 years ago Leonard Goldstein ▴ 200
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Comment: C: I can't import my gff file by `importTransprits()`,when I worked with SGSeq.
5.1 years ago Leonard Goldstein ▴ 200
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Answer: A: I can't import my gff file by `importTransprits()`,when I worked with SGSeq.
5.1 years ago Leonard Goldstein ▴ 200
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Comment: C: Which sequencing parameters are required for SGSeq analysis of splice events?
5.5 years ago Leonard Goldstein ▴ 200
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Answer: A: Which sequencing parameters are required for SGSeq analysis of splice events?
5.5 years ago Leonard Goldstein ▴ 200
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Answer: A: Which sequencing parameters are required for SGSeq analysis of splice events?
5.5 years ago Leonard Goldstein ▴ 200
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Answer: A: Cannot extract TxFeatures for a defined GRanges object
6.5 years ago Leonard Goldstein ▴ 200
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Answer: A: Cannot extract TxFeatures for a defined GRanges object
6.5 years ago Leonard Goldstein ▴ 200
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Answer: A: SGFeatureCounts function in SGSeq package failed to generate splice graphs
6.5 years ago Leonard Goldstein ▴ 200
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Answer: A: SGSeq error on getBamInfo
6.6 years ago Leonard Goldstein ▴ 200
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1.6k
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Answer: A: R session crash with SGSeq::convertToTxFeatures
6.6 years ago Leonard Goldstein ▴ 200
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Answer: A: R session crash with SGSeq::convertToTxFeatures
6.6 years ago Leonard Goldstein ▴ 200
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Comment: C: SGSeq: moving toward diffex from SGSeq analysis
6.7 years ago Leonard Goldstein ▴ 200
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Answer: A: SGSeq: moving toward diffex from SGSeq analysis
6.7 years ago Leonard Goldstein ▴ 200
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Comment: C: Isoforms detection using bioconductor
6.7 years ago Leonard Goldstein ▴ 200
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2.2k
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Comment: C: Isoforms detection using bioconductor
6.8 years ago Leonard Goldstein ▴ 200
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Comment: C: Isoforms detection using bioconductor
6.8 years ago Leonard Goldstein ▴ 200
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Answer: A: question about subsetting SGSeq results by different categories of splice events
6.9 years ago Leonard Goldstein ▴ 200
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Answer: A: question about subsetting SGSeq results by different categories of splice events
6.9 years ago Leonard Goldstein ▴ 200
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1.6k
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Answer: A: Error when running getSGFeatureCounts
7.3 years ago Leonard Goldstein ▴ 200
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Answer: A: Issues with SGSeq: analyzeVariants method returns an error...
7.4 years ago Leonard Goldstein ▴ 200
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2.1k
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Comment: C: Issues with SGSeq: analyzeVariants method returns an error...
7.4 years ago Leonard Goldstein ▴ 200
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2.1k
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Comment: C: Issues with SGSeq: analyzeVariants method returns an error...
7.4 years ago Leonard Goldstein ▴ 200
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2.1k
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Comment: C: Issues with SGSeq: analyzeVariants method returns an error...
7.5 years ago Leonard Goldstein ▴ 200
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2.1k
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Comment: C: Issues with SGSeq: analyzeVariants method returns an error...
7.5 years ago Leonard Goldstein ▴ 200
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2.1k
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Comment: C: Issues with SGSeq: analyzeVariants method returns an error...
7.6 years ago Leonard Goldstein ▴ 200
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2.1k
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Answer: A: Issues with SGSeq: analyzeVariants method returns an error...
7.6 years ago Leonard Goldstein ▴ 200
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Answer: A: Issues with SGSeq: plotFeatures method returns NULL
7.6 years ago Leonard Goldstein ▴ 200
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3.3k
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Answer: A: Issues with SGSeq: plotFeatures method returns NULL
7.6 years ago Leonard Goldstein ▴ 200
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2.1k
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Answer: A: Issues with SGSeq: analyzeVariants method returns an error...
7.6 years ago Leonard Goldstein ▴ 200
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3.3k
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Answer: A: Issues with SGSeq: plotFeatures method returns NULL
7.6 years ago Leonard Goldstein ▴ 200
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3.3k
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Answer: A: Issues with SGSeq: plotFeatures method returns NULL
7.6 years ago Leonard Goldstein ▴ 200
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3.3k
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Comment: C: Issues with SGSeq: plotFeatures method returns NULL
7.6 years ago Leonard Goldstein ▴ 200
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3.3k
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Comment: C: Issues with SGSeq: plotFeatures method returns NULL
7.7 years ago Leonard Goldstein ▴ 200
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3.3k
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Answer: A: Issues with SGSeq: plotFeatures method returns NULL
7.8 years ago Leonard Goldstein ▴ 200
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1
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3.1k
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Comment: C: Issues with SGSeq: analyzeFeatures() returns errors on BAM files
7.8 years ago Leonard Goldstein ▴ 200
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2
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3.1k
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Answer: A: Issues with SGSeq: analyzeFeatures() returns errors on BAM files
7.8 years ago Leonard Goldstein ▴ 200
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2.7k
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Comment: C: Read counts generated by SGSeq are always 0
8.2 years ago Leonard Goldstein ▴ 200
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1
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2.7k
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Comment: C: Read counts generated by SGSeq are always 0
8.2 years ago Leonard Goldstein ▴ 200
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2.7k
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Comment: C: Read counts generated by SGSeq are always 0
8.2 years ago Leonard Goldstein ▴ 200
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2.7k
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Comment: C: Read counts generated by SGSeq are always 0
8.2 years ago Leonard Goldstein ▴ 200
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2
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2.7k
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Comment: C: Read counts generated by SGSeq are always 0
8.2 years ago Leonard Goldstein ▴ 200
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