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bioconductor
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News:
Bioconductor Package Download Rate Limitation (HTTP 429)
downloads
http429
http
Bioconductor
7 hours ago
shepherl
3.9k
0
votes
2
replies
176
views
featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts
Subread
Bioconductor
9 days ago
Jessica
• 0
0
votes
2
replies
209
views
Installing Bioconductor
Bioconductor
updated 8 days ago by
Lluís Revilla Sancho
▴ 730 • written 14 days ago by
mariyahgeorge14
• 0
0
votes
0
replies
110
views
News:
EuroBioC2024 Carpentries workshops Sep 2-3
Community
Workshop
Bioconductor
EuroBioC2024
15 days ago
Maria Doyle
▴ 70
0
votes
0
replies
98
views
News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
Conference
Bioconductor
Community
21 days ago
Maria Doyle
▴ 70
0
votes
0
replies
110
views
Difference in Predictive component of PLS and OPLS Model
Metabolomics
plotGrouper
Bioconductor
ropls
PLSDAbatch
24 days ago
devarti.mahakalkar
• 0
0
votes
3
replies
266
views
How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata
Bioconductor
25 days ago
Abiologist
• 0
2
votes
2
replies
4.6k
views
Unable to install the package "tissuesGeneExpression"
bioconductor
updated 26 days ago by
Muhammad Abdullah
• 0 • written 7.0 years ago by
mdroog
▴ 10
0
votes
1
reply
165
views
BiomaRt listAttributes - which are external ?
Bioconductor
getBM
updated 4 weeks ago by
James W. MacDonald
66k • written 4 weeks ago by
Abiologist
• 0
4
votes
2
replies
284
views
Behaviour of featureCounts when quantifying multi-mapping reads
Bioconductor
featurecounts
subread
6 weeks ago
Rachael
• 0
1
vote
5
replies
398
views
Issues with installing Bioconductor packages (eg GEOquery)
GEOquery
Bioconductor
updated 7 weeks ago by
ATpoint
★ 4.2k • written 7 weeks ago by
Isabel
• 0
0
votes
1
reply
184
views
How to access the Bioconductor in Windows
Bioconductor
updated 7 weeks ago by
ATpoint
★ 4.2k • written 7 weeks ago by
fahad.rashid
• 0
0
votes
0
replies
123
views
EuroBioC2024 Registration is Open!
Community
Conference
Bioconductor
EuroBioC2024
8 weeks ago
Maria Doyle
▴ 70
0
votes
3
replies
560
views
ChAMP not available for bioconductor 3.19
Bioconductor
ChAMP
updated 8 weeks ago by
shepherl
3.9k • written 8 weeks ago by
Macsue
• 0
0
votes
0
replies
138
views
News:
Legacy Bioconductor Installation
Installation
Bioconductor
9 weeks ago
shepherl
3.9k
0
votes
0
replies
140
views
News:
Online course: Network Analysis in Systems Biology with R/Bioconductor
SystemsBiology
Bioconductor
Network
9 weeks ago
info
▴ 10
0
votes
0
replies
167
views
News:
Bioconductor Build System
Builds
Bioconductor
9 weeks ago
shepherl
3.9k
0
votes
0
replies
156
views
News:
BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024
Conference
Bioconductor
Community
9 weeks ago
Maria Doyle
▴ 70
0
votes
1
reply
186
views
Problem in execuation of filterAndTrim command in DADA2
Bioconductor
dada2
9 weeks ago • updated 25 days ago
abhisek001
• 0
0
votes
6
replies
634
views
Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix
Bioconductor
updated 8 weeks ago by
kred
• 0 • written 9 weeks ago by
minardsmitha
▴ 10
3
votes
5
replies
597
views
Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db
Bioconductor
10 weeks ago
Patadù
▴ 20
1
vote
0
replies
446
views
News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
4 months ago • updated 10 weeks ago
shepherl
3.9k
0
votes
1
reply
178
views
Recovering my account credentials on Bioconductor
Bioconductor
updated 11 weeks ago by
shepherl
3.9k • written 11 weeks ago by
cyril.dalmasso
• 0
4
votes
0
replies
355
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
12 weeks ago
shepherl
3.9k
0
votes
0
replies
168
views
News:
BioC2024 deadlines approaching
BioC2024
Bioconductor
Community
12 weeks ago
Maria Doyle
▴ 70
1
vote
0
replies
1.0k
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor
Install
3 months ago
BioinfGuru
▴ 30
3
votes
18
replies
3.3k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
13 months ago • updated 3 months ago
shepherl
3.9k
0
votes
0
replies
173
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
3 months ago
shepherl
3.9k
0
votes
7
replies
685
views
Internet connection for Bioconductor packages in Rstudio in Iran...
No_internet_connection_Packages
Proxy
Bioconductor
GEOquery
Internet_connection_problem
3 months ago
needNGS
• 0
0
votes
2
replies
269
views
bioconductor emailing list
Bioconductor
updated 4 months ago by
shepherl
3.9k • written 4 months ago by
1427972815
• 0
0
votes
0
replies
243
views
News:
Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024
Conference
Bioconductor
4 months ago
Maria Doyle
▴ 70
1
vote
2
replies
362
views
supportedOrganisms() in goseq producing Error in names(trackIds)
goseq
Bioconductor
rtracklayer
4 months ago
thomas
• 0
1
vote
0
replies
367
views
News:
Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
5 months ago • updated 4 months ago
shepherl
3.9k
0
votes
2
replies
480
views
News:
BioC2024 abstract submission is open!
BioC2024
Conference
Bioconductor
written 5 months ago by
Maria Doyle
▴ 70
0
votes
0
replies
303
views
News:
BioC2024 registration is now open!
BioC2024
Conference
Bioconductor
Community
4 months ago
Maria Doyle
▴ 70
6
votes
11
replies
1.7k
views
Packages don't update, but no error or warning is thrown
Bioconductor
5 months ago
gernophil
• 0
0
votes
1
reply
320
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
written 5 months ago by
Maria Doyle
▴ 70
2
votes
0
replies
310
views
News:
Upholding our core values: a reminder of the Bioconductor Code of Conduct
Bioconductor
5 months ago
Maria Doyle
▴ 70
0
votes
1
reply
375
views
Bioconductor: Won't Update to 3.18 with Default Command
Bioconductor
updated 5 months ago by
Lluís Revilla Sancho
▴ 730 • written 5 months ago by
vanbelj
▴ 30
1
vote
5
replies
686
views
Can't post a question containing code?
Bioconductor
updated 11 weeks ago by
NATASHA
• 0 • written 5 months ago by
DS
▴ 10
0
votes
1
reply
282
views
Limitation on single file size and package size when developing Bioc package
packagedevelopment
datalimit
Bioconductor
updated 5 months ago by
Hervé Pagès
16k • written 5 months ago by
Xin Wang
• 0
0
votes
0
replies
447
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
5 months ago
shepherl
3.9k
2
votes
1
reply
376
views
News:
"Edit" button not working
Bioconductor
Website
SupportSite
updated 5 months ago by
Lori
• 0 • written 6 months ago by
shepherl
3.9k
2
votes
2
replies
408
views
How to contact Bioconductor's test host?
Bioconductor
updated 6 months ago by
Hervé Pagès
16k • written 6 months ago by
Marek Gierlinski
▴ 30
0
votes
4
replies
1.0k
views
Bioconductor installation
Bioconductor
written 6 months ago by
Akhil
• 0
4
votes
3
replies
433
views
Bioconductor code browser time out
Bioconductor
updated 6 months ago by
Mike Smith
★ 6.5k • written 6 months ago by
Marek Gierlinski
▴ 30
3
votes
1
reply
426
views
News:
Bioconductor.org has a new look!
Bioconductor
Website
written 6 months ago by
shepherl
3.9k
0
votes
0
replies
388
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
7 months ago
info
▴ 10
0
votes
3
replies
1.8k
views
Error in library(oligo) : package or namespace load failed for ‘oligoClasses’
R
oligoClasses
Oligoclass
Bioconductor
Oligo
written 3.4 years ago by
tanya
• 0
1
vote
5
replies
2.3k
views
pd.mogene.2.0st Error Installing in R 3.1.2
oligo
microarray
r
bioconductor
written 9.5 years ago by
chandlerjd58
▴ 10
50 results • Page
1 of 1
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Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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▴ 180
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42k
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