Showing : bioconductor • reset
2
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1
reply
180
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bioconductor packages on bioconda
Bioconductor
updated 11 days ago by 67k • written 11 days ago by • 0
1
vote
3
replies
366
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Allele frequencies for ALL alleles of one SNP ?
Bioconductor
24 days ago • updated 17 days ago Abiologist • 0
10
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7
replies
1.8k
views
Why in Bioconductor community people rarely upvote questions?
bioconductor
updated 27 days ago by 4.1k • written 22 months ago by ▴ 50
1
vote
0
replies
312
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News: Bioconductor 3.20 is Released!
Bioconductor Release Software
5 weeks ago shepherl 4.1k
0
votes
0
replies
139
views
News: Announcing the GBCC2025 Logo Design Contest!
Conference Community Galaxy GBCC2025 Bioconductor
6 weeks ago Maria Doyle ▴ 90
1
vote
3
replies
573
views
Tutorial regarding metabolomics with R
Bioconductor Metabolomics xcms
updated 6 weeks ago by 67k • written 6 weeks ago by • 0
0
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0
replies
125
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News: List of Deprecated Packages for Bioc3.20
Devel Bioconductor Release
6 weeks ago shepherl 4.1k
1
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2
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511
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DESeq2 design and contrasts with 2 drug-treated and one control group
DESeq2 Bioconductor
updated 10 weeks ago by 43k • written 11 weeks ago by ▴ 10
0
votes
0
replies
185
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News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
10 weeks ago Maria Doyle ▴ 90
1
vote
8
replies
552
views
Can't post a question?
Bioconductor
updated 1 day ago by • 0 • written 10 weeks ago by • 0
2
votes
2
replies
368
views
How to read OSCA book?
BIOCON OSCA Bioconductor
12 weeks ago • updated 11 weeks ago zr • 0
1
vote
2
replies
368
views
WARNING: No Bioconductor dependencies detected.
Bioconductor Biocon
12 weeks ago katja.danielzik • 0
0
votes
2
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404
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concentration tables suitable as input for new packages?
Bioconductor
3 months ago • updated 12 weeks ago katja.danielzik • 0
2
votes
0
replies
402
views
News: Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025 Conference Bioconductor Community
3 months ago Maria Doyle ▴ 90
0
votes
5
replies
649
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
Bioconductor clusterProfiler
updated 10 weeks ago by ▴ 760 • written 3 months ago by • 0
0
votes
0
replies
488
views
News: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference Bioconductor Community
3 months ago Maria Doyle ▴ 90
0
votes
1
reply
528
views
Unable to install/use limma
limma Bioconductor
updated 3 months ago by 67k • written 3 months ago by • 0
1
vote
2
replies
375
views
Review process for delivering R packages
Bioconductor
3 months ago XFWu • 0
0
votes
1
reply
362
views
News: BioCAsia 2024 Registration Now Open!
BioCAsia2024 Conference Community Bioconductor
3 months ago Maria Doyle ▴ 90
1
vote
3
replies
768
views
Non-zero exit status error when installing GenomeInfoDbData
DECIPHER GenomeInfoDbData Bioconductor GenomeInfoDb
written 3 months ago by • 0
0
votes
0
replies
338
views
Job: PhD position: Analysis of epistatic interactions in enzymes using long-read sequencing data
NGS AI Bioconductor
updated 3 months ago by ▴ 10 • written 3 months ago by ▴ 180
0
votes
0
replies
256
views
BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024 Community Conference Bioconductor
3 months ago Maria Doyle ▴ 90
0
votes
0
replies
285
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News: EuroBioC Updates: Important Deadlines
Conference EuroBioC2024 Bioconductor Community EuroBioC
3 months ago Maria Doyle ▴ 90
2
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4
replies
465
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Bioconductor Submission question
Bioconductor
3 months ago XFWu • 0
0
votes
0
replies
232
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News: Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB CAB Bioconductor
4 months ago shepherl 4.1k
0
votes
0
replies
253
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EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community Conference Bioconductor EuroBioC2024
4 months ago Maria Doyle ▴ 90
0
votes
4
replies
703
views
featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts Subread Bioconductor
4 months ago Jessica • 0
1
vote
0
replies
502
views
News: Bioconductor Package Download Rate Limitation (HTTP 429)
downloads http429 http Bioconductor
4 months ago shepherl 4.1k
0
votes
2
replies
459
views
Installing Bioconductor
Bioconductor
updated 4 months ago by ▴ 760 • written 4 months ago by • 0
0
votes
0
replies
284
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News: EuroBioC2024 Carpentries workshops Sep 2-3
Community Workshop Bioconductor EuroBioC2024
5 months ago Maria Doyle ▴ 90
0
votes
0
replies
271
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News: BioC2024 in-person registration closes soon (July 10)
BioC2024 Conference Bioconductor Community
5 months ago Maria Doyle ▴ 90
0
votes
0
replies
328
views
Difference in Predictive component of PLS and OPLS Model
Metabolomics plotGrouper Bioconductor ropls PLSDAbatch
5 months ago devarti.mahakalkar • 0
0
votes
3
replies
466
views
How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata Bioconductor
5 months ago Abiologist • 0
2
votes
2
replies
5.0k
views
Unable to install the package "tissuesGeneExpression"
bioconductor
updated 5 months ago by • 0 • written 7.4 years ago by ▴ 10
0
votes
1
reply
357
views
BiomaRt listAttributes - which are external ?
Bioconductor getBM
updated 5 months ago by 67k • written 5 months ago by • 0
4
votes
2
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736
views
Behaviour of featureCounts when quantifying multi-mapping reads
Bioconductor featurecounts subread
5 months ago Rachael • 0
1
vote
5
replies
1.4k
views
Issues with installing Bioconductor packages (eg GEOquery)
GEOquery Bioconductor
updated 6 months ago by ★ 4.6k • written 6 months ago by • 0
0
votes
1
reply
307
views
How to access the Bioconductor in Windows
Bioconductor
updated 6 months ago by ★ 4.6k • written 6 months ago by • 0
0
votes
0
replies
263
views
EuroBioC2024 Registration is Open!
Community Conference Bioconductor EuroBioC2024
6 months ago Maria Doyle ▴ 90
0
votes
3
replies
1.2k
views
ChAMP not available for bioconductor 3.19
Bioconductor ChAMP
updated 6 months ago by 4.1k • written 6 months ago by • 0
0
votes
0
replies
261
views
News: Legacy Bioconductor Installation
Installation Bioconductor
6 months ago shepherl 4.1k
0
votes
0
replies
314
views
News: Online course: Network Analysis in Systems Biology with R/Bioconductor
SystemsBiology Bioconductor Network
6 months ago info ▴ 10
0
votes
0
replies
269
views
News: Bioconductor Build System
Builds Bioconductor
6 months ago shepherl 4.1k
0
votes
0
replies
358
views
News: BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024 Conference Bioconductor Community
6 months ago Maria Doyle ▴ 90
0
votes
1
reply
396
views
Problem in execuation of filterAndTrim command in DADA2
Bioconductor dada2
6 months ago • updated 5 months ago abhisek001 • 0
0
votes
6
replies
988
views
Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix Bioconductor
updated 6 months ago by • 0 • written 6 months ago by ▴ 10
3
votes
5
replies
880
views
Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db Bioconductor
6 months ago Patadù ▴ 20
1
vote
0
replies
624
views
News: Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition Awards Bioconductor Bioc204
8 months ago • updated 6 months ago shepherl 4.1k
0
votes
1
reply
297
views
Recovering my account credentials on Bioconductor
Bioconductor
updated 7 months ago by 4.1k • written 7 months ago by • 0
4
votes
0
replies
827
views
News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
7 months ago shepherl 4.1k
50 results • Page 1 of 1
Recent ...
Replies
Comment: Running multiple KNN queries in parallel by SamGG ▴ 360
Thank you for your detailed answer, I appreciate it and your work.
Answer: Running multiple KNN queries in parallel by Aaron Lun ★ 28k
That is correct - you can't pass the prebuilt objects to different processes. Maybe `MulticoreParam()` might work on POSIX systems but I'm …
Answer: RSubread output significantly different from bash Subread output by Gordon Smyth 52k
The difference (as ATpoint has correctly pointed out) is that Rsubread::featureCounts counts multi-mapping reads by default whereas the com…
Answer: Deseq2 Error in solve.default(qr.R(qrx)) : 'a' (1 x 0) must be square by Michael Love 43k
I would check the rank of your model matrix, and perhaps meet with a local statistician who can help you create an appropriate design matri…
Comment: sva: get a sv for RIN scores by gabriel.hoffman ▴ 170
Agreed. I'll add that with small sample size, a covariate can explain some fraction of expression variation even under the null.
Votes
Answer: Running multiple KNN queries in parallel
Answer: Running multiple KNN queries in parallel
Answer: RSubread output significantly different from bash Subread output
Answer: RSubread output significantly different from bash Subread output
Answer: How to annotate a limma Elist raw class object with an annotation file
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