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Comment:
C: Use biomaRt to get pre-calculated transcription factor binding sites (TFBS) for
6.4 years ago
goldberg.jm
▴ 10
2
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4
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1.5k
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Use biomaRt to get pre-calculated transcription factor binding sites (TFBS) for GRCh37
biomart
updated 6.4 years ago by
James W. MacDonald
67k • written 6.4 years ago by
goldberg.jm
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Comment:
C: Get rs numbers using IntronVariants() in VariantAnnotation, locateVariants
6.4 years ago
goldberg.jm
▴ 10
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Comment:
C: Use biomaRt to get pre-calculated transcription factor binding sites (TFBS) for
6.4 years ago
goldberg.jm
▴ 10
3
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3
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1.5k
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Get rs numbers using IntronVariants() in VariantAnnotation, locateVariants
variantannotation
updated 6.4 years ago by
Valerie Obenchain
★ 6.8k • written 6.5 years ago by
goldberg.jm
▴ 10
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Comment:
C: RNA-seq read alignment best practices for low-input samples
7.0 years ago
goldberg.jm
▴ 10
1
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2
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2.0k
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RNA-seq read alignment best practices for low-input samples
limma
differential gene expression
rnaseq analysis
alignment
RSEM
updated 7.0 years ago by
Aaron Lun
★ 28k • written 7.0 years ago by
goldberg.jm
▴ 10
0
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3.3k
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Comment:
C: Map TxDb.Hsapiens.UCSC.hg19.knownGene TXID keys to ENSEMBL transcript ID or Refs
8.0 years ago
goldberg.jm
▴ 10
0
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3.3k
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Comment:
C: Map TxDb.Hsapiens.UCSC.hg19.knownGene TXID keys to ENSEMBL transcript ID or Refs
8.0 years ago
goldberg.jm
▴ 10
3
votes
5
replies
3.3k
views
Map TxDb.Hsapiens.UCSC.hg19.knownGene TXID keys to ENSEMBL transcript ID or Refseq ID
annotationdbi
updated 8.0 years ago by
James W. MacDonald
67k • written 8.0 years ago by
goldberg.jm
▴ 10
6
votes
1
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1.8k
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select negative control probes with GEOquery
GEOquery
MBCB
limma
8.8 years ago
goldberg.jm
▴ 10
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