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Charles Plessy
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251
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5
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377
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Comment: Cannot install Phyloseq and dada2
by
Guido Hooiveld
★
3.2k
Did you notice this message:?
Installation paths not writeable, unable to update packages
path: C:/Program Files/R/R-4.0.0/libra…
Comment: Use of shrunken LFCs to address questions about the distribution of LFCs between
by
i.sudbery
▴
20
Thanks Mike. I might have a play with stratifying by expression level.
One reason I wasn't looking at gene set testing is that its the nul…
Answer: submitting a BSgenome package
by
deisianyufg
•
0
From my Github repository. I am sorry, I thought the package was already released and realize now that is still only in my github reposito…
Comment: PlotPCA in DESeq2 doesn't produce exactly the same result as prcomp
by
swbarnes2
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970
Is the one plot a mirror image of the other?
Answer: Use of shrunken LFCs to address questions about the distribution of LFCs between
by
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hi Ian,
Great question, and good to be concerned that the mean expression may be a confounder for either analysis, Why not stratify your…
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