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Showing :
ComplexHeatmap
•
reset
2
votes
3
replies
319
views
ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with variable number of continuous columns
ComplexHeatmap
17 days ago • updated 16 days ago
daniel.carbajo
• 0
2
votes
2
replies
167
views
ComplexHeatmap: change the names of a HeatmapAnnotation object
ComplexHeatmap
20 days ago • updated 17 days ago
daniel.carbajo
• 0
2
votes
2
replies
323
views
ComplexHeatmap crashing R session
ComplexHeatmap
12 weeks ago
Felipe
• 0
2
votes
3
replies
980
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma
heatmaps
ComplexHeatmap
updated 15 months ago by
elefth.pavlos
▴ 40 • written 15 months ago by
Sooni
▴ 10
3
votes
4
replies
2.9k
views
ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap
Complex
updated 15 months ago by
elefth.pavlos
▴ 40 • written 15 months ago by
Katharina
• 0
2
votes
5
replies
1.6k
views
ComplexHeatmap - z-score color coding failed
heatmaps
ComplexHeatmap
16 months ago
Katharina
• 0
0
votes
1
reply
1.5k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R
heatmaps
ComplexHeatmap
Heatma
updated 20 months ago by
Zuguang Gu
▴ 260 • written 20 months ago by
תום
• 0
0
votes
0
replies
929
views
Boxplot annotation per cluster and column using ComplexHeatmap
ComplexHeatmap
21 months ago
gdeniz
• 0
2
votes
2
replies
2.2k
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 9 months ago by
franciscaelibethgalvez
• 0 • written 22 months ago by
nalaspina
▴ 10
3
votes
3
replies
3.1k
views
ComplexHeatmap install error
ComplexHeatmap
updated 22 months ago by
James W. MacDonald
65k • written 22 months ago by
nalaspina
▴ 10
2
votes
3
replies
2.2k
views
Complexheatmap row-names not showing up
ComplexHeatmap
23 months ago
krushnach80
• 0
1
vote
1
reply
2.0k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap
Anno
Annotation
updated 2.7 years ago by
Zuguang Gu
▴ 260 • written 2.7 years ago by
Ashish Jain
▴ 10
1
vote
0
replies
1.0k
views
ComplexHeatmap: Swapping between left_annotation and right_annotation results in a blank space
anno_block
ComplexHeatmap
left_annotation
right_annotation
2.8 years ago
glich
• 0
2
votes
5
replies
3.3k
views
News:
New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr
ATACSeq
DiffBind
ComplexHeatmap
ChIPSeq
updated 16 months ago by
Junsik
• 0 • written 2.9 years ago by
Rory Stark
★ 5.2k
3
votes
2
replies
2.0k
views
Complex Heatmap shows just one color
Heatmap
ComplexHeatmap
colorRamp
3.0 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.1k
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
3.1 years ago
vanbelj
▴ 30
2
votes
4
replies
5.9k
views
Complexheatmap Installation Issue
ComplexHeatmap
3.3 years ago
legro.melanie
• 0
0
votes
0
replies
644
views
How to show rownames in densityheatmaps
ComplexHeatmap
3.4 years ago
adR
▴ 30
0
votes
2
replies
1.1k
views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap
R
3.6 years ago
pthom010
• 0
0
votes
2
replies
11k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 3.9 years ago by
Zuguang Gu
▴ 260 • written 3.9 years ago by
AR3513
• 0
1
vote
6
replies
9.9k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r
rnaseq
complexHeatmap
annotation
updated 3.9 years ago by
Zuguang Gu
▴ 260 • written 3.9 years ago by
camillab.
▴ 10
0
votes
1
reply
1.5k
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap
UpSet
3.9 years ago
moldach
▴ 20
3
votes
2
replies
2.1k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger
complexheatmap
R
clustering
updated 4.0 years ago by
Gordon Smyth
50k • written 4.0 years ago by
eggrandio
• 0
0
votes
6
replies
4.6k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 4.6 years ago by
Zuguang Gu
▴ 260 • written 4.6 years ago by
AB
▴ 110
3
votes
7
replies
3.2k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix
heatmap
ComplexHeatmap
missing values
R
updated 4.6 years ago by
Zuguang Gu
▴ 260 • written 4.6 years ago by
mohammedtoufiq91
▴ 10
3
votes
2
replies
6.8k
views
ComplexHeatmap removes row labels if annotation is added
annotation
show_row_names
complexheatmap
4.8 years ago
alexw858
• 0
0
votes
1
reply
813
views
ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
updated 5.0 years ago by
Zuguang Gu
▴ 260 • written 5.0 years ago by
shbrief
▴ 20
4
votes
3
replies
2.9k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap
r
updated 5.0 years ago by
Zuguang Gu
▴ 260 • written 5.0 years ago by
Ram
▴ 200
0
votes
1
reply
2.3k
views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap
software error
updated 5.0 years ago by
James W. MacDonald
65k • written 5.0 years ago by
jmKeith
• 0
2
votes
1
reply
3.9k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 5.2 years ago by
Zuguang Gu
▴ 260 • written 5.2 years ago by
Vinicius Henrique da Silva
▴ 40
0
votes
1
reply
1.2k
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
5.2 years ago
Goku
• 0
0
votes
2
replies
1.6k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 6.2 years ago by
jokergoo
▴ 200 • written 6.2 years ago by
James W. MacDonald
65k
5
votes
12
replies
10k
views
Combining ComplexHeatmap with other plot types
complexheatmap
ggplot2
updated 6.5 years ago by
Zuguang Gu
▴ 260 • written 6.5 years ago by
my4
▴ 10
1
vote
5
replies
8.8k
views
How to add both row and column labels to Complexheatmap
complexheatmap
labels
6.6 years ago
dilawerkh4
• 0
0
votes
0
replies
1.6k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
6.6 years ago
Luiz
• 0
0
votes
1
reply
1.9k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
6.6 years ago
Bogdan
▴ 670
3
votes
2
replies
4.3k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
6.7 years ago
CodeAway
▴ 70
0
votes
0
replies
1.2k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 6.7 years ago by
Gordon Smyth
50k • written 6.7 years ago by
johnnytam100
• 0
2
votes
3
replies
2.2k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap
maftools
updated 6.7 years ago by
anand_mt
▴ 90 • written 6.7 years ago by
Bogdan
▴ 670
0
votes
2
replies
1.7k
views
Extracting subclusters from original data
complexheatmap
metabolomics
updated 6.8 years ago by
sina.nassiri
▴ 130 • written 6.8 years ago by
Mina
• 0
1
vote
2
replies
2.3k
views
legend with gradient in ComplexHeatmap
complexheatmap
6.8 years ago
AR3513
• 0
2
votes
2
replies
1.4k
views
about reshaping a data frame
maftools
complexheatmap
updated 6.8 years ago by
Haiying.Kong
▴ 110 • written 6.8 years ago by
Bogdan
▴ 670
0
votes
1
reply
1.5k
views
Oncoprint function in ComplexHeatmap
complexheatmap
6.9 years ago
Bogdan
▴ 670
0
votes
5
replies
2.0k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
7.0 years ago
AR3513
• 0
0
votes
1
reply
1.1k
views
Error in Heatmap...
complexheatmap
7.1 years ago
baranikumar22
• 0
8
votes
1
reply
9.2k
views
extracting the genes associated with the clusters
heatmap.2
pheatmap
complexheatmap
heatplus
updated 7.2 years ago by
Gavin Kelly
▴ 680 • written 7.2 years ago by
Bogdan
▴ 670
0
votes
1
reply
1.1k
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 7.2 years ago by
Steve Lianoglou
★ 13k • written 7.2 years ago by
d r
▴ 150
1
vote
2
replies
1.9k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap
bug
7.3 years ago
brt381
• 0
2
votes
1
reply
3.5k
views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap
heatmap.2
dendrogram
dendextend
heatmap
updated 7.5 years ago by
jokergoo
▴ 200 • written 7.5 years ago by
enricoferrero
▴ 660
0
votes
1
reply
1.5k
views
How to manage multiple legends in heatmap_legend_param (ComplexHeatmap) ?
ComplexHeatmap
complexheatmap
7.6 years ago
g.atla
▴ 10
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Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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