Commentator
Created A Comment With At Least 3 Up-Votes
Awarded 199 times (see all awards). Earned by the
following contributors:
9 years, 6 months ago
United States
C: Why does Homo.sapiens import TxDb.Hsapiens.UCSC.hg19.knownGene instead of TxDb.H
9 years, 8 months ago
United States
C: Help to find Volunteer who can review my bioconductor package before submission
9 years, 8 months ago
United States
C: Help to find Volunteer who can review my bioconductor package before submission
9 years, 8 months ago
United States
C: What is logFC and "B" in methylation analysis ??
9 years, 9 months ago
United States
Bootstrap confidence intervals on RNA-seq expression from Kallisto
9 years, 10 months ago
Zentrum für Molekularbiologie, Universi…
Normalization methodology in DESeq/DESeq2 vs edgeR
9 years, 11 months ago
The city by the bay
C: Big differences in logfoldchange for some genes between edgeR and DESeq2
9 years, 11 months ago
The city by the bay
C: Determining direction of logFC in limma
9 years, 11 months ago
WEHI, Melbourne, Australia
Normalization methodology in DESeq/DESeq2 vs edgeR
9 years, 11 months ago
WEHI, Melbourne, Australia
C: Normalization methodology in DESeq/DESeq2 vs edgeR
9 years, 11 months ago
The city by the bay
Normalization methodology in DESeq/DESeq2 vs edgeR
9 years, 11 months ago
The city by the bay
C: Normalization methodology in DESeq/DESeq2 vs edgeR
10 years ago
United States
C: Estimating and removing batch effects from rna-seq dataset
10 years ago
Seattle, WA, United States
C: How to remove out of bound rows from granges
10 years ago
Icahn School of Medicine at Mount Sinai…
pass limma contrast matrix variable
10 years ago
Icahn School of Medicine at Mount Sinai…
How to remove dublicate probesets matching to the same gene, after toptable in order to have a genelist without dublicate gene Symbols for further GO analysis ?
10 years, 2 months ago
The city by the bay
C: LIMMA: interpreting interaction terms in an unbalanced factorial design with rep
10 years, 3 months ago
The city by the bay
edgeR (3.10.2) contrast question for experimental factors combined as a group
10 years, 3 months ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
10 years, 3 months ago
The city by the bay
C: glmTreat() fails to shrink coefficients?
10 years, 3 months ago
United States
C: Export from limma, edit, import to same class
10 years, 4 months ago
Icahn School of Medicine at Mount Sinai…
How to remove dublicate probesets matching to the same gene, after toptable in order to have a genelist without dublicate gene Symbols for further GO analysis ?
10 years, 4 months ago
The city by the bay
edgeR (3.10.2) contrast question for experimental factors combined as a group
10 years, 4 months ago
The city by the bay
C: edgeR (3.10.2) contrast question for experimental factors combined as a group
10 years, 4 months ago
WEHI, Melbourne, Australia
Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
10 years, 4 months ago
United States
Bootstrap confidence intervals on RNA-seq expression from Kallisto
10 years, 4 months ago
United States
C: Bootstrap confidence intervals on RNA-seq expression from Kallisto
10 years, 5 months ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
10 years, 5 months ago
United States
C: LIMMA producing too many significant results
10 years, 5 months ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
10 years, 6 months ago
United States
C: DESeq2 normalisation: is the size of the gene taken into account?
10 years, 8 months ago
Icahn School of Medicine at Mount Sinai…
How to remove dublicate probesets matching to the same gene, after toptable in order to have a genelist without dublicate gene Symbols for further GO analysis ?
10 years, 8 months ago
The city by the bay
C: What is difference between classic and GLM edgeR
10 years, 8 months ago
United States
C: Integrating DESeq2 and TopGO for Enrichment
10 years, 11 months ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
10 years, 11 months ago
United States
C: edgeR and Normalization of RNAseq data using ERCC controls
10 years, 11 months ago
United States
C: How to design formula in DESeq2 when setting blind=FALSE in rlog transformation?
11 years ago
WEHI, Melbourne, Australia
C: Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
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