Commentator
Created A Comment With At Least 3 Up-Votes
Awarded 193 times (see all awards). Earned by the
following contributors:
8 years, 3 months ago
United States
C: What is logFC and "B" in methylation analysis ??
8 years, 3 months ago
United States
Bootstrap confidence intervals on RNA-seq expression from Kallisto
8 years, 5 months ago
Zentrum für Molekularbiologie, Universi…
Normalization methodology in DESeq/DESeq2 vs edgeR
8 years, 5 months ago
The city by the bay
C: Big differences in logfoldchange for some genes between edgeR and DESeq2
8 years, 5 months ago
The city by the bay
C: Determining direction of logFC in limma
8 years, 6 months ago
WEHI, Melbourne, Australia
Normalization methodology in DESeq/DESeq2 vs edgeR
8 years, 6 months ago
WEHI, Melbourne, Australia
C: Normalization methodology in DESeq/DESeq2 vs edgeR
8 years, 6 months ago
The city by the bay
Normalization methodology in DESeq/DESeq2 vs edgeR
8 years, 6 months ago
The city by the bay
C: Normalization methodology in DESeq/DESeq2 vs edgeR
8 years, 7 months ago
United States
C: Estimating and removing batch effects from rna-seq dataset
8 years, 7 months ago
Seattle, WA, United States
C: How to remove out of bound rows from granges
8 years, 7 months ago
Scripps Research, La Jolla, CA
pass limma contrast matrix variable
8 years, 7 months ago
Scripps Research, La Jolla, CA
How to remove dublicate probesets matching to the same gene, after toptable in order to have a genelist without dublicate gene Symbols for further GO analysis ?
8 years, 8 months ago
The city by the bay
C: LIMMA: interpreting interaction terms in an unbalanced factorial design with rep
8 years, 9 months ago
The city by the bay
edgeR (3.10.2) contrast question for experimental factors combined as a group
8 years, 9 months ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
8 years, 9 months ago
The city by the bay
C: glmTreat() fails to shrink coefficients?
8 years, 9 months ago
United States
C: Export from limma, edit, import to same class
8 years, 10 months ago
Scripps Research, La Jolla, CA
How to remove dublicate probesets matching to the same gene, after toptable in order to have a genelist without dublicate gene Symbols for further GO analysis ?
8 years, 11 months ago
The city by the bay
edgeR (3.10.2) contrast question for experimental factors combined as a group
8 years, 11 months ago
The city by the bay
C: edgeR (3.10.2) contrast question for experimental factors combined as a group
8 years, 11 months ago
WEHI, Melbourne, Australia
Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
8 years, 11 months ago
United States
Bootstrap confidence intervals on RNA-seq expression from Kallisto
8 years, 11 months ago
United States
C: Bootstrap confidence intervals on RNA-seq expression from Kallisto
9 years ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
9 years ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
9 years ago
United States
C: DESeq2 normalisation: is the size of the gene taken into account?
9 years, 3 months ago
Scripps Research, La Jolla, CA
How to remove dublicate probesets matching to the same gene, after toptable in order to have a genelist without dublicate gene Symbols for further GO analysis ?
9 years, 3 months ago
The city by the bay
C: What is difference between classic and GLM edgeR
9 years, 5 months ago
United States
edgeR and Normalization of RNAseq data using ERCC controls
9 years, 5 months ago
United States
C: edgeR and Normalization of RNAseq data using ERCC controls
9 years, 5 months ago
United States
C: How to design formula in DESeq2 when setting blind=FALSE in rlog transformation?
9 years, 6 months ago
WEHI, Melbourne, Australia
C: Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
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