I'm running the package MBASED which uses various bioconductor packages. When I run MBASED on a small dataset it runs fine however when I run it on larger datasets it throws the following error:
Error: BiocParallel errors element index: 32, 33, 34, 35, 36, 37, ... first error: invalid 'times' value In addition: Warning message: stop worker failed: 'clear_cluster' receive data failed: reached elapsed time limit
Furthermore it sometimes also throws the error:
Error in serialize(data, node$con, xdr = FALSE) : ignoring SIGPIPE signal
I'm not sure what these errors mean and don't know how to go about debugging them. Any help on this would be appreciated.