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c.sae-lee2
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@csae-lee2-15304
Last seen 6.6 years ago
I'm trying to read my IDAT files using this code below.
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minfi")
library(minfi)
rgSet= read.metharray.exp("/Volumes/LeePhD2016-ICM-Advisor-Hyang-Min/A3762_Raw_Data/Samples")
but I got an error message:
> rgSet= read.metharray.exp("/Volumes/LeePhD2016-ICM-Advisor-Hyang-Min/A3762_Raw_Data/Samples")
Error in while (m%/%128 == 1) { : argument is of length zero
Timing stopped at: 45.62 5.679 60.42
Could you please give my any ways to fix it?
Thank you so much.
Best wishes,
Lee
were you able to find the answer? I am getting the same error. thank you
I was getting this error too - I'm pretty sure it was because of corrupted and/or missing IDAT files when I was moving them across to the computer I'm using for the analysis, in case other people come looking.