Biostar Epic microarray

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924

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champ epic microarray normalization minfi

4.7 years ago Laura • 0

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751

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minfi epic microarray bioconductor

updated 6 months ago by Lucy • 0 • written 4.9 years ago by c.sae-lee2 • 0

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1.4k

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bioconductor methylation epic microarray champ

5.1 years ago csappleby-mallinder1 • 0

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1.2k

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methylation epic microarray minfi methylationepic

5.9 years ago nhejazi • 0

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752

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shinymethyl minfi epic microarray methylationepic qualitycontrol

6.0 years ago chelsey.ju • 0

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1.1k

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rnbeads methylation illumina epic microarray

6.4 years ago rasii • 0

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2.2k

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minfi dmpfinder dmp illuminahumanmethylationepicanno.ilmn10b.hg19 epic microarray

updated 6.6 years ago by James W. MacDonald 62k • written 6.6 years ago by Biologist ▴ 110

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1.2k

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minfi methylation EPIC microarray illumina

updated 6.8 years ago by Kasper Daniel Hansen 6.5k • written 6.8 years ago by rasii • 0

8 results • Page 1 of 1

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Comment: TCGA: clinical data and expression data by sharifnstu1203002m • 0

Hello, I am in the same problem. I downloaded "transcriptome profiling" data of TCGA by using the Bioconductor package. I get my gene expr…

Comment: How to normalize long-read RNA-seq data for comparison with short-reads by Jonathan Göke ▴ 40

Great to hear that you are using Bambu. Yes, I think that part of your question does not have one correct answer, there are many ways in wh…

Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R by Gordon Smyth 47k

Choosing which samples to normalize together is not dependent on library size but rather on (1) whether the tissue samples are comparable a…

Comment: Atena package - error (new user) by lalanis1 • 0

Thanks a lot, Calvo. Will run my files with revised version soon! Best regards, Lalani

Comment: Nested paired design with covariates in limma by Gordon Smyth 47k

Please post a new question with enough detail to answer your question. If you want bespoke advance, then you need to post the details of yo…

Votes

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R

C: Can't install TopmedPipeline Package

Comment: Question about GWASTools gdsSubset

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Awards • All

Scholar to James W. MacDonald 62k

Teacher to Michael Love 39k