Question: KEGGSOAP:: KEGGxmlns object not found
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gravatar for doctor.dee005
12 months ago by
doctor.dee0050 wrote:

The command I had given and errors:

get.genes.by.pathway("path:eco00020")
Error in .SOAP(KEGGserver, "get_genes_by_pathway", .soapArgs = list(pathway_id = pathway.id),  :
object 'KEGGxmlns' not found.

 

What is this KEGGxmlns object?

keggsoap keggrest • 176 views
ADD COMMENTlink modified 12 months ago • written 12 months ago by doctor.dee0050

The KEGGSOAP package was removed from Bioconductor in 2.13 release as documented here. Please ensure you are using updated packages and package functions as many functionality from KEGGSOAP was moved to KEGGREST. Please see the documentation.

ADD REPLYlink modified 12 months ago • written 12 months ago by shepherl ♦♦ 1.4k
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