Question: igraph clustering for gene coexpression network
gravatar for aiswaryabioinfo
7 months ago by
aiswaryabioinfo0 wrote:

I have a gene co-expression network obtained from RNA-seq data which has more than 10000 nodes and more than 10lakh edges. I need to cluster this network. Can anyone please suggest a method to cluster this effectively.

I tried with igraph R package, in igraph package many clustering methods are there. How can I identify which is the appropriate method for large gene co-expression network.

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