DEP p.val adjustment
1
@826599-20511
Last seen 5.7 years ago
Hi,
I was just wondering if anybody knew the adjustment DEP uses for the p.val adj column in it's output?
Thanks
DEP
P.vals
adjustment
• 987 views
@james-w-macdonald-5106
Last seen 17 hours ago
United States
Have you read the help page for test_diff
? It says:
Value
A SummarizedExperiment object containing FDR estimates of differential expression
And FDR is generally assumed to mean Benjamini and Hochberg's method (for example, if you ask p.adjust
to use fdr
, you get BH
).
Login before adding your answer.