Hi, Is there a way for DESeq to output standard error and confidence intervals in addition to the fold change and p-values? Thank you. Regards, Nirmala ---------------------------------------------------------------------- -------------- Nirmala Akula, MS, PhD Contractor, Human Genetics Branch NIMH/NIH Blg 35, Rm 1A/205 Bethesda, MD - 20892 Phone# 301-451-4258 [[alternative HTML version deleted]]

Dear Nirmala currently, no. It is feasible to compute these, though, and we aim to extend the package for this within the current calendar year. Best wishes Wolfgang Feb/21/12 10:01 PM, Akula, Nirmala (NIH/NIMH) [C] scripsit:: > Hi, > > Is there a way for DESeq to output standard error and confidence intervals in addition to the fold change and p-values? > > Thank you. > > Regards, > Nirmala > > -------------------------------------------------------------------- ---------------- > Nirmala Akula, MS, PhD > Contractor, > Human Genetics Branch > NIMH/NIH > Blg 35, Rm 1A/205 > Bethesda, MD - 20892 > Phone# 301-451-4258 > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- Best wishes Wolfgang Wolfgang Huber EMBL http://www.embl.de/research/units/genome_biology/huber