Question

GenomicAlignments update for R version 3.1.2

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david.dekoeyer • 0

@daviddekoeyer-7143

Last seen 9.4 years ago

Canada

Hi,

I am trying to install GenomicAlignments in R 3.1.2.

biocLite("GenomicAlignments")

I get the following error message:

package ‘GenomicAlignments’ is not available (for R version 3.1.2)

Is there a work around or when will the package be updated for the latest version of R?

Thanks,

-David

genomicalignments • 1.7k views

ADD COMMENT • link updated 9.3 years ago by jeremy.wayne.schroeder • 0 • written 9.4 years ago by david.dekoeyer • 0

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Hi David -- The package is available for the latest version of R. Can you start R again, try source("http://bioconductor.org/biocLite.R"); biocLite("GenomicAlignments"), then biocValid(), and finally augment your question with the output of the command sessionInfo()?

ADD REPLY • link 9.4 years ago Martin Morgan 25k

score 0 · Answer 1 · 2015-01-29

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jeremy.wayne.schroeder • 0

@jeremywayneschroeder-7306

Last seen 9.3 years ago

United States

Hi David,

I had this issue as well. Try this first:

biocLite("BiocUpgrade")

After upgrading I was able to install without issue. Hopefully this helps you.

-Jeremy

ADD COMMENT • link 9.3 years ago jeremy.wayne.schroeder • 0