Any advice regarding the following installation error? biocLite() does not prompt for any additional updates.

> biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene")
BioC_mirror: http://bioconductor.org
Using Bioconductor version 3.1 (BiocInstaller 1.17.3), R version 3.2.0.
Installing package(s) ‘TxDb.Hsapiens.UCSC.hg19.knownGene’
trying URL 'http://bioconductor.org/packages/3.1/data/annotation/src/contrib/TxDb.Hsapiens.UCSC.hg19.knownGene_3.0.0.tar.gz'
Content type 'application/x-gzip' length 18661634 bytes (17.8 MB)
opened URL
==================================================
downloaded 17.8 MB

* installing *source* package ‘TxDb.Hsapiens.UCSC.hg19.knownGene’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Error : .onLoad failed in loadNamespace() for 'TxDb.Hsapiens.UCSC.hg19.knownGene', details:
  call: dbGetQuery(conn, SQL)
  error: error in evaluating the argument 'conn' in selecting a method for function 'dbGetQuery': Error in get(name, envir = asNamespace(pkg), inherits = FALSE) :
  object 'dbConn' not found
Calls: ::: -> get

Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/home/lg390/R/x86_64-unknown-linux-gnu-library/3.2/TxDb.Hsapiens.UCSC.hg19.knownGene’

The downloaded source packages are in
    ‘/tmp/Rtmpg6vrx3/downloaded_packages’
Warning message:
In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘TxDb.Hsapiens.UCSC.hg19.knownGene’ had non-zero exit status

For the session info below, I have also loaded AnnotationDbi, GenomicFeatures, DBI and RSQLite, as I thought these might be relevant. 

> sessionInfo()
R Under development (unstable) (2014-11-01 r66923)
Platform: x86_64-unknown-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_GB.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_GB.UTF-8        LC_COLLATE=en_GB.UTF-8    
 [5] LC_MONETARY=en_GB.UTF-8    LC_MESSAGES=en_GB.UTF-8   
 [7] LC_PAPER=en_GB.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats4    parallel  stats     graphics  grDevices utils     datasets
[8] methods   base     

other attached packages:
 [1] GenomicFeatures_1.19.10 AnnotationDbi_1.29.14   Biobase_2.27.1         
 [4] GenomicRanges_1.19.33   GenomeInfoDb_1.3.12     IRanges_2.1.35         
 [7] S4Vectors_0.5.16        BiocGenerics_0.13.4     RSQLite_1.0.0          
[10] DBI_0.3.1               BiocInstaller_1.17.3   

loaded via a namespace (and not attached):
 [1] base64enc_0.1-2          BatchJobs_1.5            BBmisc_1.8              
 [4] BiocParallel_1.1.11      biomaRt_2.23.5           Biostrings_2.35.7       
 [7] bitops_1.0-6             brew_1.0-6               checkmate_1.5.1         
[10] codetools_0.2-10         compiler_3.2.0           digest_0.6.8            
[13] fail_1.2                 foreach_1.4.2            GenomicAlignments_1.3.25
[16] iterators_1.0.7          RCurl_1.95-4.5           Rsamtools_1.19.26       
[19] rtracklayer_1.27.7       sendmailR_1.2-1          stringr_0.6.2           
[22] tools_3.2.0              XML_3.98-1.1             XVector_0.7.3           
[25] zlibbioc_1.13.0        

Yes this is only affecting the devel branch.

This is because of some changes that I made to AnnotationDbi and GenomicFeatures.  If you are using devel you need those changes in order for this package to work.  Unfortunately, GenomicFeatures is currently not yet updated to biocLite because of a separate issue that is causing the package to not build, I will work to get that resolved ASAP.  But in the meantime, if you INSTALL GenomicFeatures from svn you should be able to get the latest version (1.19.14).

  Marc