a package for read.fasta
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Angel ▴ 40
@angel-7981
Last seen 4.5 years ago
Berlin

sorry guys,

you know another package to read.fasta in rstudio because i could not install seqinr

thanks

seqinr fasta • 2.0k views
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Mike Smith ★ 5.1k
@mike-smith
Last seen 10 hours ago
EMBL Heidelberg / de.NBI

The ShortRead package (http://bioconductor.org/packages/ShortRead/) contains the function readFasta() which might be of use.

 

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thanks both Mike and Herve

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@herve-pages-1542
Last seen 5 hours ago
Seattle, WA, United States

Hi,

You can also have a look at the readDNAStringSet() function in the Biostrings package, which ShortRead::readFasta() is based on.

Cheers,

H.

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