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seqinr
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Seqinr for FASTQ files?
fastq
fast
seqinr
updated 3.1 years ago by
ATpoint
★ 4.8k • written 3.1 years ago by
hank00000
• 0
0
votes
0
replies
1.4k
views
Match peptide within protein sequence fasta and extract position information based on protein sequence
R
seqinr
biostrings
6.7 years ago
rabalski
• 0
0
votes
1
reply
957
views
SeqinR socketConnection error help?
seqinr
updated 6.8 years ago by
Martin Morgan
25k • written 6.8 years ago by
daviqd.halvorsen
• 0
0
votes
0
replies
1.2k
views
Sequencing database tool in R: tracking Sanger and NGS of large-scale directed evolution projects
rmysql
fastq
seqinr
ngs
sangerseqr
7.0 years ago
JoeMG
• 0
2
votes
1
reply
5.5k
views
Reading fasta file with multiple sequences
multiple sequences
bioconductor
rstudio
seqinr
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
Riot
• 0
1
vote
1
reply
1.4k
views
Given a multifasta file and for each sequence, shuffle middle part of the sequence leaving the flanks intact and the opposite
shuffle
regioner
seqinr
updated 8.4 years ago by
Martin Morgan
25k • written 8.4 years ago by
Dimitris Polychronopoulos
▴ 80
1
vote
7
replies
3.7k
views
seqinr package - choosebank() function not connecting
seqinr
choose bank
error message
updated 9.2 years ago by
Martin Morgan
25k • written 9.2 years ago by
jayanthisahithi
▴ 10
4
votes
3
replies
4.3k
views
a package for read.fasta
seqinr
fasta
updated 9.7 years ago by
Hervé Pagès
16k • written 9.7 years ago by
Angel
▴ 40
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Comment: FlowSOM is unable to create Output
by
EvangelinePope
• 0
I will remember it, Thank you so much for sharing.
Answer: Limma suqeezeVar
by
Gordon Smyth
52k
I am not quite clear why you're not using the limma package directly, because it will compute all the variances and the df automatically fo…
Comment: Discrepancies in normalised count data vs unnormalised
by
swbarnes2
★ 1.4k
Well, that's going to make each sample normalize quite differently. So you should expect large difference between normalized and unnormali…
Comment: Can't install BioC packages (and manager) behind firewall
by
Marcel Ramos
700
Hi Delphine, Please make sure that your SSL certificates are up to date. Check with your system's administrator. Your browser may be usin…
Comment: Limma trend with limpa
by
Alejandro
• 0
Dear Gordon, Thank you very much!
Votes
Deseq2 DE analysis of host-pathogen samples (model separately or jointly?)
Comment: Check removeBatchEffect effectiveness
Answer: Check removeBatchEffect effectiveness
A: what should I do with many zero counts from Salmon quantification
Comment: parameters of filterByExpr
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