I am trying to setup Spade for FlowJo using the following instructions.
When I run R 3.2.2 it tells me that there the current version is not supported. When I try R 3.2.1 everything seems to go fine until I test with the library(spade) command which generates 4 warning and an error about needing to use 3.2.2.
I am running this on Windows XP SP 3 32 bit.
Error in file(filename, "r", encoding = encoding) :
cannot open the connection
In addition: Warning message:
In file(filename, "r", encoding = encoding) :
InternetOpenUrl failed: 'The connection with the server was reset'
Warning: unable to access index for repository https://bioconductor.org/packages/3.2/bioc/src/contrib
Warning: unable to access index for repository https://bioconductor.org/packages/3.2/bioc/bin/windows/contrib/3.2
'biocLite.R' failed to install 'BiocInstaller', use
package ‘BiocInstaller’ is not available (for R version 3.2.2)