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Question: could not find function "DNAcopy"
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gravatar for ckr123
2.2 years ago by
ckr1230
ckr1230 wrote:

Hi,

I recently updated DNAcopy without a problem, but was no longer able to find the function "DNAcopy". Specifically, when I invoke DNAcopy(), R returns "Error: could not find function "DNAcopy". But the ?DNAcopy did take me to the help page of DNAcopy. I also tested other functions in the package such as segment and CNA, and they were all working well. Tried detach and reinstall, but the problem remains the same. Suggestions?

> sessionInfo()
R version 3.2.3 (2015-12-10)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: Red Hat Enterprise Linux Server release 6.7 (Santiago)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8   
 [6] LC_MESSAGES=en_US.UTF-8    LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] DNAcopy_1.44.0       BiocInstaller_1.20.1

loaded via a namespace (and not attached):
[1] tools_3.2.2
ADD COMMENTlink modified 2.2 years ago by Martin Morgan ♦♦ 21k • written 2.2 years ago by ckr1230

I don't think there ever was a function called DNAcopy(). The vignette has CNA().

ADD REPLYlink written 2.2 years ago by Martin Morgan ♦♦ 21k

Thanks Martin. I guess I was being silly and misunderstood the reference manual.

ADD REPLYlink written 2.2 years ago by ckr1230
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