Error viewing the data set Golub_Merge
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@shramanathakur-9856
Last seen 5.3 years ago

I am new to R. I am trying to view the Golub_merge dataset in R using the View() function.
> View(Golub_Merge)

and, I get this error:

Error: VECTOR ELT() can only be applied to a 'list', not a 'builtin'

Please help.

golubEsets rstudio • 647 views
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@james-w-macdonald-5106
Last seen 2 days ago
United States

Golub_Merge is an ExpressionSet, not a 'matrix-like R object'. If you want to use View, you have to extract whatever you want to look at first.

View(exprs(Golub_Merge))

View(pData(phenoData(Golub_Merge)))

See ?ExpressionSet for more information.
 

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Actually, View(Golub_Merge) works for me, because as.data.frame(Golub_Merge) is defined and works. I guess there is another package involved, masking the as.data.frame generic from BiocGenerics. OP, please EDIT your question to add the output of traceback() (immediately after the error) and sessionInfo().

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