can't install workflow "rnaseqGene" with Bioconductor version3.3
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cagenet34 ▴ 20
@cagenet34-10910
Last seen 3.3 years ago
Toulouse, France, INRA

Hello,

I'm trying to install "rnaseqGene" workflow but I have the following error

Bioconductor version 3.3 (BiocInstaller 1.22.2), ?biocLite for help
Error: BiocInstaller:::BIOC_VERSION == "3.2" n'est pas TRUE

From this I deduced that I have to use bioconductor version 3.2 but I use the latest version of R and don't know how to use an old Bioconductor version.

Thanks

 

R version 3.3.0 (2016-05-03)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows >= 8 x64 (build 9200)

locale:
[1] LC_COLLATE=French_France.1252  LC_CTYPE=French_France.1252    LC_MONETARY=French_France.1252 LC_NUMERIC=C                  
[5] LC_TIME=French_France.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] BiocInstaller_1.22.2

loaded via a namespace (and not attached):
[1] tools_3.3.0
 

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bioconductor workflowinstall error rnaseqgene • 1.9k views
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@valerie-obenchain-4275
Last seen 2.9 years ago
United States

Hi,

Sorry, the workflows are in flux right now. The workflow builder has been upgraded to support release but not all of the workflows are building successfully hence the message you see about version 3.2. We hope to have this issue resolved in the next couple of weeks.

Valerie

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