Question: Quality Assessment of one color Agilent arrays?
gravatar for Bouzid.a
3.1 years ago by
Bouzid.a0 wrote:

Dear Bioconductor,

I have an expression array dataset done with Agilent one color array, and I wanted to do QC using arrayQualityMetrics. I read in the raw Agilent data using limma and background correct and normalization was done according to limma User's guide. This works fine and I got an EList and EListRaw objects. However it seems arrayQualityMetrics doesn't accept these objects as input. Please, How can I assess the quality control of my data. Any one has an idea?

Thanks a lot,



ADD COMMENTlink written 3.1 years ago by Bouzid.a0
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 220 users visited in the last hour