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MOHAMMAD
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@MOHAMMAD-24781
Last seen 3.6 years ago
My Genome wide annotation package does not contain a column for gene_id or ENTREZID
I was trying to use the following function to get the gene ontology :
ggo <- groupGO(gene = gene_0.1,
OrgDb = org.Pf.plasmo.db,
ont = "CC",
level = 3,
readable = TRUE)
i got the following error
Error in .getDBLoc(x, cols[i], value = value) : 'col' value 'ENTREZID' is not defined
is there any alternative tool/package that utilizes "SYMBOL" instead
thank you in advance