Failed to load "org.Mm.eg.db" package
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Nicol • 0
@484b4da5
Last seen 19 days ago
Peru

Hi everybody. I got this error when I tried to load the "org.Mm.eg.db" package:


Error: package or namespace load failed for ‘org.Mm.eg.db’:
 .onLoad failed in loadNamespace() for 'org.Mm.eg.db', details:
  call: l$contains
  error: $ operator is invalid for atomic vectors

How can I solve this? Thank you!

org.Mm.eg.db • 210 views
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I get the same error. I read somewhere that it has to do with RSQLite and their update (2.2.6). However, I cannot install an older version of RSQLite (2.2.5) as it seems to not be supported by my RStudio any more. Any help appreciated.

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shepherl 2.7k
@lshep
Last seen 12 hours ago
United States

There are two other recently reported issues that address this issue as it appears to be an issue with RSQlite and Rstudio. Both of these threads have some options for work arounds:

  1. .onLoad failed in loadNamespace() for 'org.Hs.eg.db'

  2. Couldn't load org.Hs.eg.db

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same here. I want to update data on my website but the database not load. Please help me out. I read somewhere that it has to do with RSQLite and their update (2.2.6). However, I cannot install an older version of RSQLite (2.2.5) as it seems to not be supported by my RStudio any more. Any help appreciated. Team: wallmountedhub

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Please follow the 1st link that Lori gave you above. You will find a lot of helpful information there. Thanks

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Thank you shepherl! Those threads were really helpful

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