Hi, I am trying to access a recently added annotation of EPICv2 DNA methylation array from AnnotationHub using the code below but cannot retrieve it. I found this modified manifest useful from recent paper; https://bioconductor.org/packages/devel/data/annotation/vignettes/EPICv2manifest/inst/doc/EPICv2manifest.html

> ah <- AnnotationHub()
> EPICv2manifest <- ah[["AH116484"]]
Error: AH116484 added after current Hub snapshot date.
  added: 2024-02-09
  snapshot date: 2023-10-23
  To access this resource update your version of Bioconductor

R 4.3.3, Bioconductor 3.18, BiocManager 1.30.22, AnnotationHub 3.10.0

Do I need to update Bioconductor to development version? that needs R to be 4.4 and I don't want that, any quick fix plz? Thanks

You are pointing to a devel package, but are using the release version of R/Bioc. To use the package you need R-devel and Bioc-devel, or to wait for the upcoming release.

Hello,

To access the manifest, you can download it in CSV format as Additional file 4 here: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-024-10027-5#Sec31. Click on "Additional File 4" (it's quite large, over 1GB).

Cheers, Tim