Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
DNAMethylation
•
reset
0
votes
0
replies
69
views
Batch Correction while implementing QSEA package
qsea
MEDIPS
MEDIPSData
DNAMethylation
13 days ago
User3088
• 0
0
votes
0
replies
348
views
Job:
Postdoctoral Research Associate in Computational Epigenomics
Phd
SingleCell
DNAMethylation
Shanghai
JobPosting
5 months ago
xiaolong
• 0
0
votes
7
replies
1.6k
views
Methylation Analysis experiment design using Limma
DNAMethylation
limma
methylationArrayAnalysis
10 months ago • updated 9 months ago
hortense96
• 0
0
votes
0
replies
399
views
DMRcate error need at least two non-NA values to interpolate
DNAMethylation
DMRcate
10 months ago
Macsue
• 0
1
vote
6
replies
1.1k
views
unable to access Annotationhub latest record
DNAMethylation
AnnotationHub
EPICv2manifest
annotation
updated 10 months ago by
Tim Peters
▴ 200 • written 10 months ago by
s.malik
• 0
1
vote
3
replies
1.7k
views
Error in GOmeth function of missMethyl when EPICv2 annotation is used
DNAMethylation
GO
MethylationArray
missMethyl
EPICv2
11 months ago • updated 4 months ago
s.malik
• 0
0
votes
4
replies
1.6k
views
Seeking Strategies for Managing Duplicate CpG Entries in EPIC v2 Manifest
DNAMethylation
EPICv2
IlluminaHumanMethylationEPICmanifest
updated 11 months ago by
James W. MacDonald
68k • written 11 months ago by
rae.alshammari
▴ 10
1
vote
4
replies
1.0k
views
limma design model for categorical variable
DNAMethylation
limmaGUI
biostatistics
limma
updated 12 months ago by
Gordon Smyth
52k • written 12 months ago by
Jitendra
▴ 10
0
votes
2
replies
505
views
Sample-specific methylation values using QSEA
DNAMethylation
cfMeDIP-seq
cfDNA
qsea
12 months ago • updated 13 days ago
User3088
• 0
1
vote
4
replies
1.2k
views
EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
DNAMethylation
MethylationArray
methylationArrayAnalysis
illumina
12 months ago
mikat
• 0
0
votes
1
reply
738
views
topGO() analysis of DMPs in missMethyl methylation analysis
DNAMethylation
missMethyl
Pathways
21 months ago
Grace
• 0
2
votes
6
replies
1.5k
views
cpg.annotate() in DMRcate error
DNAMethylation
methylationArrayAnalysis
DMRcate
MethylationArrayData
MethylationArray
updated 21 months ago by
Tim Peters
▴ 200 • written 21 months ago by
Grace
• 0
2
votes
6
replies
1.3k
views
No enriched GO terms CpGs
DNAMethylation
missMethyl
updated 23 months ago by
belinda.phipson
▴ 40 • written 23 months ago by
Joana
• 0
0
votes
0
replies
785
views
A survey of computational setups for Illumina Infinium DNA methylation EPIC array pipeline
DNAMethylation
wateRmelon
Computation
minfi
2.5 years ago
calen.p.ryan
• 0
3
votes
8
replies
1.8k
views
Annotation using QSEA package
DNAMethylation
QSEA
MEDIP
3.6 years ago
rtrivedi1
▴ 10
3
votes
5
replies
2.9k
views
Why the LogFC and delta-beta value are different in ChAMP
DNAMethylation
ChAMP
updated 11 months ago by
sup0903
• 0 • written 4.2 years ago by
Hongbii
• 0
16 results • Page
1 of 1
Recent ...
Replies
Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
interesting. it could be since this is not your installation that it was installed by an admin that you do not have access to perform this…
Comment: Overcoming confounding in batch effect correction
by
ATpoint
★ 4.6k
Hi, this is not related to Bioconductor directly. And no, you cannot correct anything because in your own batch you only have a single samp…
Comment: MEDIPS - error using MEDIPS.CpGenrich
by
sg
• 0
I have the same error when I use 22 chrs with the paramenters chr.select: Error in h(simpleError(msg, call)) : error in evaluating the …
Comment: Overcoming confounding in batch effect correction
by
mimi
• 0
https://www.bioconductor.org/packages/release/BiocViews.html#___BiologicalQuestion
Comment: GSVA on RNAseq data
by
Robert Castelo
★ 3.4k
Hi Bob, I have not investigated whether a particular unit of expression works better than others, but using logTPM or logCPM units of expr…
Votes
Overcoming confounding in batch effect correction
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
Awards
• All
Popular Question
to
shepherl
4.1k
Popular Question
to
Gordon Smyth
52k
Scholar
to
ATpoint
★ 4.6k
Popular Question
to
Robert Castelo
★ 3.4k
Popular Question
to
Sean Davis
21k
Locations
• All
Denmark,
1 minute ago
Belgium,
24 minutes ago
United States,
27 minutes ago
WEHI, Melbourne, Australia,
27 minutes ago
Germany,
1 hour ago
Traffic: 1148 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6