I want to check out this book on GitHub, but I'm not sure how to read it.

First, I tried creating a new project in RStudio, and then used git clone in the project directory to get the files from the repository:

bash https://github.com/OSCA-source/OSCA.git After cloning the repository, I ran the following command to render the book:

r bookdown::render_book("C:/Users/***/Documents/R/oscabook/inst/book/index.Rmd") The result was:

bash Output created: docs/index.html [1] "C:/Users/**/Documents/R/oscabook/inst/book/docs/index.html" I checked the generated HTML file, and its content was identical to the Bioconductor release version, which only includes the introduction.

I'm not sure how to access the complete content, similar to what's available here.

If anyone could help me figure this out, I would greatly appreciate it!

The OSCA book is hosted by Bioconductor here: https://bioconductor.org/books/release/OSCA/. You can just use the browser and consult any chapter or (sub-book) you want online. It can be a bit confusing but need to click the title of the sub-book you want to read to go to it.

For example: http://bioconductor.org/books/3.19/OSCA.basic or http://bioconductor.org/books/3.19/OSCA.multisample