7 months ago by
CRUK, Cambridge, UK
The Volcano plot is a new feature that is currently only available in the development version, so if you are using the Bioconductor release (3.4) it is not available yet. It will be officially released in
Bioconductor 3.5 as
DiffBind 2.4 at the end of the month.
If you are on the official release but want to use the new plot now, I have tested the dev version and it can be installed alongside the current release. You can do this going to the development landing page for DiffBind:
and downloading one of the package options for
DiffBind_2.3.12 (or later), then install it (using install.packages() or, in RStudio, the Install Packages option form the Tool menu. If you are on Windows or Mac you can download a binary; if you are Linux, you should use the Package Source tarball.
The initial implementation of Volcano plots is fairly basic, let me know if there are feature that would be useful.