Bioconductor Atac-seq

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ATACseqQC Fragmentsizedistribution ATAC-seq

2.1 years ago Xiaojie Cheng • 0

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csaw ATAC-seq Tn5 insertions

updated 2.6 years ago by Antonio Ahn ▴ 10 • written 2.6 years ago by alexandre.blais ▴ 50

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atacseqqc atac-seq R bioconductor rsamtools

updated 3.0 years ago by Kevin Blighe 3.8k • written 3.0 years ago by rita.monteiro • 0

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limma edger atac atac-seq

updated 3.3 years ago by Aaron Lun ★ 28k • written 3.3 years ago by pgugger ▴ 70

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RNA-seq DNA-seq ATAC-seq proteomics microbiome Job

3.4 years ago lhuang7 ▴ 50

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single cell sequencing RNA-Seq ChIP-Seq ATAC-Seq Job

3.9 years ago • updated 3.8 years ago Julie Zhu ★ 4.3k

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cqn normalization conditionalquantilenormalization atac-seq

updated 3.9 years ago by Kasper Daniel Hansen 6.5k • written 3.9 years ago by Eric.Martin • 0

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ATAC-seq ATACseqQC

updated 3.9 years ago by Julie Zhu ★ 4.3k • written 3.9 years ago by Shuang He • 0

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ATAC-seq ATACseqQC

updated 3.9 years ago by Julie Zhu ★ 4.3k • written 3.9 years ago by Shuang He • 0

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ATACseqQC ATAC-seq error split bam file

updated 4.1 years ago by contact • 0 • written 4.1 years ago by theodore.georgomanolis • 0

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DiffBind FRiP ATAC-Seq dba.show dba.count

updated 4.2 years ago by Rory Stark ★ 4.9k • written 4.2 years ago by Gary ▴ 20

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ATACseqQC ATAC-Seq Library complexity estimateLibComplexity

4.2 years ago Gary ▴ 20

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ATACseqQC bamQC ATAC-Seq totalQNAMEs MAPQ

updated 4.3 years ago by Julie Zhu ★ 4.3k • written 4.3 years ago by Gary ▴ 20

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ATACseqQC ATAC-Seq quality analysis fragment size distribution library complexity

updated 4.3 years ago by Julie Zhu ★ 4.3k • written 4.3 years ago by Gary ▴ 20

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ATAC-Seq ChIPQC

updated 4.3 years ago by James W. MacDonald 63k • written 4.3 years ago by Subinoy Biswas ▴ 10

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793

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diffbind atac-seq differential analysis deseq2

updated 4.6 years ago by Rory Stark ★ 4.9k • written 4.6 years ago by duvaller • 0

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3

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diffbind R atac-seq

updated 4.6 years ago by Rory Stark ★ 4.9k • written 4.6 years ago by Firas • 0

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CQN atac-seq normalization edgeR

5.1 years ago shankasal • 0

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9

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atac-seq CQN edger

updated 5.1 years ago by Aaron Lun ★ 28k • written 5.1 years ago by shankasal • 0

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7

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atac-seq software error atacseqqc

updated 5.3 years ago by Haibo.Liu • 0 • written 5.3 years ago by José Luis Lavín ▴ 10

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deseq2 differential binding analysis deseq atac-seq

updated 5.3 years ago by Michael Love 40k • written 5.3 years ago by rbronste ▴ 60

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atac-seq sample size Peak Normalize

5.4 years ago jaime.alvarez.benayas • 0

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deseq2 atac-seq chipseq differential binding analysis

updated 5.5 years ago by Aaron Lun ★ 28k • written 5.5 years ago by rbronste ▴ 60

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rnaseq atac-seq iso-seq chipseq Job

5.5 years ago tyler.chukwu • 0

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diffbind atac-seq dba.count

updated 5.5 years ago by Rory Stark ★ 4.9k • written 5.5 years ago by zhaolin20042008 • 0

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1

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deseq2 atac-seq

updated 5.5 years ago by Rory Stark ★ 4.9k • written 5.5 years ago by zhongjixx • 0

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3

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Rsubread atac-seq narrowpeaks featurecounts

updated 5.5 years ago by Wei Shi ★ 3.5k • written 5.5 years ago by j.bergenstrahle ▴ 80

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diffbind read counting warning message chromatin atac-seq

updated 5.6 years ago by Gord Brown ▴ 650 • written 5.6 years ago by tgjohnst • 0

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9

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1.9k

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dba.count atac-seq diffbind

updated 5.6 years ago by Gord Brown ▴ 650 • written 5.6 years ago by ew152 • 0

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1

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740

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diffbind dba.count atac-seq

updated 5.6 years ago by Gord Brown ▴ 650 • written 5.6 years ago by VCLRAC001 • 0

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1

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1.4k

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homer atac-seq

updated 5.9 years ago by Maciej Jończyk • 0 • written 5.9 years ago by niu.shengyong • 0

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11

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1.5k

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SSH atac-seq

updated 6.1 years ago by Gord Brown ▴ 650 • written 6.1 years ago by zhaolin20042008 • 0

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7

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2.9k

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diffbind atac-seq

updated 6.1 years ago by Rory Stark ★ 4.9k • written 6.1 years ago by niu.shengyong • 0

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6

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2.1k

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atac-seq diffbind

6.1 years ago zhaolin20042008 • 0

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1

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1.1k

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atac-seq diffbind

6.1 years ago zhaolin20042008 • 0

1

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7

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2.3k

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diffbind chipseq atac-seq rory stark

updated 6.2 years ago by Rory Stark ★ 4.9k • written 6.2 years ago by andrew.gehrke • 0

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0

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897

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footprinting centipede atac-seq dnaseq

6.2 years ago rbronste ▴ 60

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3

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8.2k

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atac-seq diffbind macs2 macs peak finding

updated 6.2 years ago by BioinfGuru ▴ 20 • written 6.8 years ago by igor ▴ 40

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4

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2.3k

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atac-seq atac deseq2 sva combat

updated 6.3 years ago by Michael Love 40k • written 6.3 years ago by g.atla ▴ 10

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4

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diffbind dnaseseq atac-seq

6.4 years ago rbronste ▴ 60

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3

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2.3k

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atac-seq

updated 7.2 years ago by Rory Stark ★ 4.9k • written 7.2 years ago by simonjean434 ▴ 10

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chipseq atac-seq gro-seq bsseq rnaseq Job

7.6 years ago Jaritz,Markus ▴ 20