Bioconductor Rory stark

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CHIPQC Diffbind chipseq rory stark Thomas Carroll

updated 2.7 years ago by arisarkar88 ▴ 40 • written 5.0 years ago by bioinfouser2 ▴ 10

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diffbind rory stark chip seq

updated 4.5 years ago by Rory Stark ★ 5.2k • written 5.0 years ago by bioinfouser2 ▴ 10

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diffbind Rory Stark coordinate

updated 5.1 years ago by Rory Stark ★ 5.2k • written 5.2 years ago by Guandong Shang ▴ 40

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diffbind rory stark

7.8 years ago andrew.gehrke • 0

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rory stark

8.3 years ago • updated 7.9 years ago mforoo1 • 0

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diffbind chipseq atac-seq rory stark

updated 8.1 years ago by Rory Stark ★ 5.2k • written 8.1 years ago by andrew.gehrke • 0

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Rory Stark diffbind TMM edgeR chipseq

updated 8.8 years ago by Rory Stark ★ 5.2k • written 9.0 years ago by akdess • 0

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Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0

Thank you so much for your reply.

Comment: Analyzing TnSeq data with DESeq2 by Tom • 0

[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…

Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k

This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…

Comment: Filtering after DESeq by caroline.zanchi • 0

... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…

Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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