I am having trouble running feature counts as implemented in Rsubread on my mac
My script is:
I get an output file with numbers instead of gene names and no counts.
I have 2 warning messages.
WARNING: reads from the same pair were found not adjacent to each ||
|| other in the input (due to read sorting by location or ||
|| reporting of multi-mapping read pairs). ||
|| Read re-ordering is performed.
package ‘Rsubread’ was built under R version 3.3.3
(I am using 3.3.2)
I am not reproducing the whole output file because I get a
"language "af" is not one of the supported languages ['en']!"
from the site.
Thanks and best wishes,