Cytoband information for rice
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Didi ▴ 10
@didi-10905
Last seen 2.7 years ago
Spain

Hi,

Does anyone know from where getting the cytoband information for rice (Oryza sativa) to draw the ideogram for a circular visualization?

Thanks a lot.

Regards,

D.
rice cytoband circlize ggbio ideogram • 1.8k views
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@danielvantwisk-13028
Last seen 4.4 years ago

The cytoband information you are looking for can be downloaded from the ensembl ftp site using the following URL:

ftp://ftp.ensemblgenomes.org/pub/release-36/plants/mysql/oryza_sativa_core_36_89_7/karyotype.txt.gz
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Didi ▴ 10
@didi-10905
Last seen 2.7 years ago
Spain

Thanks a lot. 

Regards,

D.

 
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