How to see all data from getPopStats()?
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justinyi10 ▴ 10
@justinyi10-13409
Last seen 6.7 years ago

Hello,

I am trying to get the counts for my entire gating set, but when I enter the getPopStats() function, the result is abbreviated (shown below). Is there any way to view all the data or export the data to an excel spreadsheet?

> getPopStats(gs)
           name Population   Parent Count ParentCount
  1:  A1_11.fcs   monocyte     root     1         182
  2:  A1_11.fcs      HLADR monocyte     1           1
  3:  A1_23.fcs   monocyte     root   800       30000
  4:  A1_23.fcs      HLADR monocyte   775         800
  5: A2_11a.fcs   monocyte     root   730       30000
 ---                                                 
114:  D5_22.fcs      HLADR monocyte   932        1608
115: D6_10a.fcs   monocyte     root   866       30000
116: D6_10a.fcs      HLADR monocyte   844         866
117: D6_22a.fcs   monocyte     root   693       30000
118: D6_22a.fcs      HLADR monocyte   661         693

bioconductor • 458 views
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