0
votes
1
answer
81
views
1
answer
QC and normalization of 450K data from CSVs instead of IDATs
normalization minfi champ 450k csv written 3 months ago by Simone170 • updated 3 months ago by Yuan Tian40
0
votes
0
answers
143
views
0
answers
0
votes
0
answers
213
views
0
answers
0
votes
0
answers
369
views
0
answers
6
votes
2
answers
1.3k
views
6 follow
2
answers
Plotting Differentially Methylated Regions
minfi bumphunter 450k region written 2.5 years ago by cardenasca40 • updated 21 months ago by Dimitris Polychronopoulos50
0
votes
2
answers
545
views
2
answers
0
votes
0
answers
356
views
0
answers
2
votes
1
answer
672
views
1
answer
Minfi: estimateCellCounts rgSet
minfi 450k flowsorted.blood.450k written 2.5 years ago by cardenasca40 • updated 22 months ago by Habil Zare110
0
votes
0
answers
397
views
0
answers
News: ChAMP2 is online
epigenetics champ news 450k epic written 23 months ago by Yuan Tian80
0
votes
1
answer
598
views
1
answer
2
votes
1
answer
1.1k
views
1
answer
4
votes
1
answer
888
views
1
answer
How to remove unwanted probes before normalization in 450k data
minfi champ 450k rnbeads written 2.5 years ago by AST50 • updated 2.5 years ago by James W. MacDonald47k
4
votes
1
answer
2.7k
views
1
answer
Illumina MethylationEPIC vs. 450K
methylumi minfi methyanalysis illuminahumanmethylation450k.db 450k written 2.6 years ago by Ahdee40 • updated 2.6 years ago by Peter Hickey380
0
votes
0
answers
575
views
0
answers
3
votes
1
answer
518
views
1
answer
0
votes
0
answers
473
views
0
answers
0
votes
3
answers
1.6k
views
3
answers
ComBat with multiple batches
sva combat 450k written 2.7 years ago by ben.run9740
0
votes
1
answer
710
views
1
answer
preprocessFunnorm in minfi
normalization minfi illuminahumanmethylation450k.db 450k written 2.8 years ago by b.tawk0 • updated 2.8 years ago by James W. MacDonald47k
1
vote
1
answer
1.1k
views
1
answer
Loading beta values into minfi
minfi 450k written 2.9 years ago by CC10 • updated 2.9 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
715
views
1
answer
Loading RData files into ChAMP
microarray champ 450k written 3.0 years ago by CC10 • updated 3.0 years ago by champ450k0
0
votes
0
answers
718
views
0
answers
1
vote
1
answer
846
views
1
answer
5
votes
1
answer
1.4k
views
1
answer
Limma on Methylation Data - Fold Change Question
limma 450k written 3.2 years ago by andrew.j.skelton73310 • updated 3.2 years ago by Aaron Lun21k
0
votes
3
answers
660
views
3
answers
0
votes
1
answer
1.8k
views
1
answer
methyAnalysis M values and Beta Values
methyanalysis 450k written 3.5 years ago by andrew.j.skelton73310 • updated 3.5 years ago by Pan Du80
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