0
votes
1
answer
54
views
1
answer
QC and normalization of 450K data from CSVs instead of IDATs
normalization minfi champ 450k csv written 6 weeks ago by Simone170 • updated 6 weeks ago by Yuan Tian40
0
votes
0
answers
124
views
0
answers
0
votes
0
answers
183
views
0
answers
0
votes
0
answers
330
views
0
answers
6
votes
2
answers
1.2k
views
6 follow
2
answers
Plotting Differentially Methylated Regions
minfi bumphunter 450k region written 2.3 years ago by cardenasca40 • updated 19 months ago by Dimitris Polychronopoulos50
0
votes
2
answers
505
views
2
answers
0
votes
0
answers
338
views
0
answers
2
votes
1
answer
636
views
1
answer
Minfi: estimateCellCounts rgSet
minfi 450k flowsorted.blood.450k written 2.3 years ago by cardenasca40 • updated 20 months ago by Habil Zare110
0
votes
0
answers
382
views
0
answers
News: ChAMP2 is online
epigenetics champ news 450k epic written 21 months ago by Yuan Tian80
0
votes
1
answer
566
views
1
answer
2
votes
1
answer
972
views
1
answer
4
votes
1
answer
838
views
1
answer
How to remove unwanted probes before normalization in 450k data
minfi champ 450k rnbeads written 2.4 years ago by AST50 • updated 2.3 years ago by James W. MacDonald46k
4
votes
1
answer
2.7k
views
1
answer
Illumina MethylationEPIC vs. 450K
methylumi minfi methyanalysis illuminahumanmethylation450k.db 450k written 2.4 years ago by Ahdee40 • updated 2.4 years ago by Peter Hickey370
0
votes
0
answers
543
views
0
answers
3
votes
1
answer
495
views
1
answer
0
votes
0
answers
453
views
0
answers
0
votes
3
answers
1.5k
views
3
answers
ComBat with multiple batches
sva combat 450k written 2.5 years ago by ben.run9740
0
votes
1
answer
674
views
1
answer
preprocessFunnorm in minfi
normalization minfi illuminahumanmethylation450k.db 450k written 2.6 years ago by b.tawk0 • updated 2.6 years ago by James W. MacDonald46k
1
vote
1
answer
1.0k
views
1
answer
Loading beta values into minfi
minfi 450k written 2.7 years ago by CC10 • updated 2.7 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
694
views
1
answer
Loading RData files into ChAMP
microarray champ 450k written 2.8 years ago by CC10 • updated 2.8 years ago by champ450k0
0
votes
0
answers
695
views
0
answers
1
vote
1
answer
813
views
1
answer
5
votes
1
answer
1.3k
views
1
answer
Limma on Methylation Data - Fold Change Question
limma 450k written 3.0 years ago by andrew.j.skelton73310 • updated 3.0 years ago by Aaron Lun20k
0
votes
3
answers
639
views
3
answers
0
votes
1
answer
1.7k
views
1
answer
methyAnalysis M values and Beta Values
methyanalysis 450k written 3.4 years ago by andrew.j.skelton73310 • updated 3.4 years ago by Pan Du80
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