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Error:object 'lookup_tax_id_by_organism' not found with makeOrgPackageFromNCBI
annotationforge written 5 months ago by sbbinfo90 • 0 • updated 5 months ago by James W. MacDonald ♦ 49k
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makeOrgPackageFromNCBI - cannot connect to BioMart
annotationforge written 6 months ago by lukeholman • 0 • updated 6 months ago by James W. MacDonald ♦ 49k
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Running GO analysis via Prostar
proteomics annotationforge rforproteomics prostar written 8 months ago by lolli.langan • 20 • updated 8 months ago by Samuel Wieczorek • 0
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Queries around makeOrgPackageFromNCBI
annotationforge software error R written 9 months ago by laural710 • 0 • updated 9 months ago by Guido Hooiveld • 2.4k
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AnnotationForge, RNAseq, and non-model organism
rnaseq annotationforge nonmodel written 14 months ago by mlpimsler • 0 • updated 14 months ago by James W. MacDonald ♦ 49k
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custom annotation for GO enrichment
annotation go clusterprofiler annotationforge gsea written 18 months ago by cabezasdelafuented • 10
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Error during makeOrgPackageFromNCBI
annotationforge makeorgpackagefromncbi written 19 months ago by gabciamm • 0
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AnnotationForge makeOrgPackage rsqlite_send_query error
annotationforge makeorgpackage written 19 months ago by marisa.e.miller • 0
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makeOrgPackage in AnnotationForge "GID" problem
annotationforge written 22 months ago by samanthapizi • 0 • updated 22 months ago by James W. MacDonald ♦ 49k
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create custom 'System Biology' annotation package - class not found
annotationdbi annotationforge annotationdb written 2.0 years ago by Laure Cougnaud • 20
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RSQLite::dbGetPreparedQuery() is deprecated in AnnotationForge
microarray annotation annotate annotationforge written 2.0 years ago by MOD • 0
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Easy way to turn OrgDb object from AnnotationHub into package?
annotationdbi annotationforge pathview annotationhub written 2.0 years ago by Jenny Drnevich • 1.9k • updated 2.0 years ago by Valerie Obenchain • 6.7k
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problem with makeOrgPackageFromNCBI when making an annotation package
annotationforge R bioconductor written 2.5 years ago by wssdandan2009 • 0 • updated 2.1 years ago by theobroma22 • 10
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error while making database using Annotationforge package
annotationforge error database written 2.6 years ago by kritikamish99 • 10 • updated 2.6 years ago by Guido Hooiveld • 2.4k
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sqliteSendQuery error in AnnotationForge bioconductor package
annotation annotationdbi annotationforge R bioconductor written 4.0 years ago by Stephen H • 0 • updated 2.6 years ago by Axel Klenk • 920
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AnnotationForge failed due to "Parameter 0 does not have length 1"
annotationforge written 3.1 years ago by zhilongjia • 0 • updated 3.1 years ago by Valerie Obenchain • 6.7k
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errors for makeOrgPackageFromNCBI in AnnotationForge
annotationforge written 3.2 years ago by songeric1107 • 0 • updated 3.2 years ago by Hervé Pagès ♦♦ 13k
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Error in makeOrgPackageFromNCBI for Medicago truncatula
annotation annotationforge written 3.3 years ago by chiapello.m • 0 • updated 3.3 years ago by Martin Morgan ♦♦ 22k
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makeOrgPackage: possible to add option to allow GO terms now in GO.db?
go annotationforge makeorgpackage written 3.7 years ago by Keith Hughitt • 120
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Error during makeOrgPackageFromNCBI
annotation annotationdbi annotationforge makeorgpackagefromncbi written 4.1 years ago by oliver.tills • 0
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IlluminaHumanMethylation450k.db has undeclared dependency on AnnotationForge
annotationforge written 4.4 years ago by Simon Anders • 3.5k • updated 4.4 years ago by Marc Carlson • 7.2k
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AnnotationForge: org.Xx.eg.db created with makeOrgPackage() is missing org.Xx.egGO object.
organismdb annotationdbi annotationforge written 4.4 years ago by artur • 70 • updated 4.4 years ago by Marc Carlson • 7.2k
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Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
go goprofiles annotationforge bimap written 4.4 years ago by artur • 70
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error: "'names' attribute [16] must be the same length as the vector [2]", using Making Organism packages use of makeOrgPackage()
annotation go annotationforge written 4.4 years ago by artur • 70 • updated 4.4 years ago by Marc Carlson • 7.2k
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Failure to Install Organism Package from AnnotationForge
organism annotationdbi annotationforge written 5.0 years ago by Guest User • 12k
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