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Recent ...
Replies
Comment: How to apply limma-trend or voom to batch corrected single cell data? (non-integ
by
hainct
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0
Thank you @alun
Comment: EnhancedVolcano plot with colCustom
by
Neeraja Vegesna
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Hi Kevin,
It worked once I added `names(keyvals.colour1)[keyvals.colour1 == '#8F8F8F'] <- 'NA'`.
![volcanoplot][1]
Thanks a lot for you…
Comment: CUT&Tag differential peak analysis using Diffbind, with pre-calculated normaliza
by
mwong043
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0
Thanks Rory. I tried the first method by defining a vector containing the normalisation factors for my samples and it worked.
I am just wo…
Comment: EnhancedVolcano plot with colCustom
by
Kevin Blighe
2.8k
Hi, that's great that it works with a lower number of groups. Can you re-check the logic flow when you are using more groups? *EnhancedVolc…
Comment: EnhancedVolcano plot with colCustom
by
Neeraja Vegesna
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Hi Kevin,
When I run the function in my previous post, the only warning I get is the following..
> Warning message: One or more p-values …
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