2
votes
2
answers
160
views
2
answers
5
votes
1
answer
458
views
1
answer
Filtering for ATAC-seq
edger cqn atac-seq written 5 months ago by shankasal0 • updated 5 months ago by Aaron Lun21k
4
votes
1
answer
266
views
1
answer
1
vote
1
answer
264
views
1
answer
0
votes
1
answer
896
views
1
answer
7
votes
1
answer
948
views
6 follow
1
answer
2
votes
1
answer
690
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 2.0 years ago by s14376430 • updated 2.0 years ago by Aaron Lun21k
0
votes
0
answers
408
views
0
answers
0
votes
2
answers
715
views
2
answers
DESeq2 stuck running
cqn deseq2 written 4.4 years ago by Guest User12k • updated 4.4 years ago by Michael Love19k
2
votes
2
answers
1.8k
views
2
answers
0
votes
3
answers
672
views
3
answers
Voom and CQN input
normalization limma cqn written 4.9 years ago by Heather Estrella30 • updated 4.9 years ago by Gordon Smyth35k
0
votes
1
answer
909
views
1
answer
0
votes
1
answer
1.3k
views
1
answer
Large logCPM values when using offsets in edgeR for normalization
sequencing edger cqn edaseq written 5.6 years ago by Ying W90 • updated 5.6 years ago by Gordon Smyth35k
0
votes
3
answers
1.8k
views
3
answers
DESeq2
normalization classification clustering deseq cqn deseq2 written 5.6 years ago by Wolfgang Huber13k • updated 5.6 years ago by Michael Love19k
0
votes
1
answer
594
views
1
answer
using offsets from EDASeq and cqn for edgeR
cqn edaseq written 5.7 years ago by Gordon Smyth35k • updated 5.7 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
735
views
1
answer
using offsets from EDASeq and cqn
go edger cqn edaseq written 5.7 years ago by love150
0
votes
2
answers
889
views
2
answers
0
votes
4
answers
650
views
4
answers
normalization method & dispersion estimation RNA-seq data
normalization edger cqn written 5.9 years ago by Guest User12k • updated 5.9 years ago by Gordon Smyth35k
0
votes
1
answer
522
views
1
answer
CQN normalization
cqn written 6.3 years ago by Sermsawat Tunlaya-anukit90 • updated 6.2 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
512
views
1
answer
Error message running through CQN Vignette
cancer cqn written 6.3 years ago by Richard Friedman2.0k • updated 6.3 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
605
views
1
answer
CQN Package
rnaseq cqn written 6.3 years ago by Xin Davis30 • updated 6.3 years ago by Kasper Daniel Hansen6.4k
0
votes
0
answers
321
views
0
answers
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