2
votes
2
answers
102
views
2
answers
5
votes
1
answer
237
views
1
answer
Filtering for ATAC-seq
edger cqn atac-seq written 10 weeks ago by shankasal0 • updated 10 weeks ago by Aaron Lun20k
4
votes
1
answer
216
views
1
answer
1
vote
1
answer
217
views
1
answer
0
votes
1
answer
720
views
1
answer
7
votes
1
answer
824
views
6 follow
1
answer
2
votes
1
answer
599
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 21 months ago by s14376430 • updated 21 months ago by Aaron Lun20k
0
votes
0
answers
383
views
0
answers
0
votes
2
answers
640
views
2
answers
DESeq2 stuck running
cqn deseq2 written 4.2 years ago by Guest User12k • updated 4.2 years ago by Michael Love18k
2
votes
2
answers
1.7k
views
2
answers
0
votes
3
answers
624
views
3
answers
Voom and CQN input
normalization limma cqn written 4.6 years ago by Heather Estrella30 • updated 4.6 years ago by Gordon Smyth34k
0
votes
1
answer
869
views
1
answer
0
votes
1
answer
1.2k
views
1
answer
Large logCPM values when using offsets in edgeR for normalization
sequencing edger cqn edaseq written 5.3 years ago by Ying W90 • updated 5.3 years ago by Gordon Smyth34k
0
votes
3
answers
1.7k
views
3
answers
DESeq2
normalization classification clustering deseq cqn deseq2 written 5.4 years ago by Wolfgang Huber13k • updated 5.3 years ago by Michael Love18k
0
votes
1
answer
556
views
1
answer
using offsets from EDASeq and cqn for edgeR
cqn edaseq written 5.4 years ago by Gordon Smyth34k • updated 5.4 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
687
views
1
answer
using offsets from EDASeq and cqn
go edger cqn edaseq written 5.4 years ago by love150
0
votes
2
answers
846
views
2
answers
0
votes
4
answers
611
views
4
answers
normalization method & dispersion estimation RNA-seq data
normalization edger cqn written 5.6 years ago by Guest User12k • updated 5.6 years ago by Gordon Smyth34k
0
votes
1
answer
470
views
1
answer
CQN normalization
cqn written 6.0 years ago by Sermsawat Tunlaya-anukit90 • updated 6.0 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
488
views
1
answer
Error message running through CQN Vignette
cancer cqn written 6.0 years ago by Richard Friedman2.0k • updated 6.0 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
579
views
1
answer
CQN Package
rnaseq cqn written 6.1 years ago by Xin Davis30 • updated 6.1 years ago by Kasper Daniel Hansen6.4k
0
votes
0
answers
298
views
0
answers
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