Showing: edaseqreset
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How to remove samples from EDAseq SeqExpressionSeq
edaseq written 5 months ago by Jon BrĂ¥te150 • updated 5 months ago by davide risso830
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EDASeq, RUVSeq and edgeR together
edger edaseq ruvseq written 8 months ago by zoppoli pietro10 • updated 8 months ago by davide risso830
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Mean-Variance Plot for Normalised Counts
edaseq meanvarplot written 12 months ago by Dario Strbenac1.4k • updated 12 months ago by davide risso830
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Incorporating 'offset' into edgeR pipeline
edger edaseq offset written 17 months ago by alakatos90 • updated 17 months ago by Aaron Lun24k
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Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 19 months ago by llo10 • updated 19 months ago by davide risso830
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How is the mean-variance plot calculated?
edaseq written 3.1 years ago by neverstop0 • updated 3.1 years ago by Wolfgang Huber13k
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How to use normalized values by EDASeq in edgeR?
edger edaseq written 3.8 years ago by rahilsethi0 • updated 3.8 years ago by Gordon Smyth37k
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False positives due to GC content correction - DESeq2
edaseq deseq2 written 4.9 years ago by Guest User12k • updated 4.9 years ago by Michael Love24k
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DESeq2 : Using Normalised ReadCount matrix from EDAseq in DESeq2
normalization edaseq deseq2 written 5.0 years ago by Guest User12k • updated 5.0 years ago by Michael Love24k
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EDASeq within normalization
normalization edaseq written 5.7 years ago by Catarina Almeida30 • updated 5.7 years ago by davide risso830
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problem with aveLogCPM.default in edgeR
edger edaseq written 6.1 years ago by suzy.stiegelmeyer@syngenta.com40 • updated 6.1 years ago by Gordon Smyth37k
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Large logCPM values when using offsets in edgeR for normalization
sequencing edger cqn edaseq written 6.3 years ago by Ying W90 • updated 6.2 years ago by Gordon Smyth37k
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using offsets from EDASeq and cqn for edgeR
cqn edaseq written 6.3 years ago by Gordon Smyth37k • updated 6.3 years ago by Kasper Daniel Hansen6.4k
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using offsets from EDASeq and cqn
go edger cqn edaseq written 6.3 years ago by love150
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problem in reading bam files with EDASeq
rsamtools edaseq assign written 7.4 years ago by rcaloger500 • updated 7.4 years ago by davide risso830
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