1
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1
answer
47
views
1
answer
Mean-Variance Plot for Normalised Counts
edaseq meanvarplot written 8 weeks ago by Dario Strbenac1.4k • updated 8 weeks ago by davide risso740
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votes
0
answers
42
views
0
answers
2
votes
2
answers
141
views
2
answers
0
votes
1
answer
175
views
1
answer
Incorporating 'offset' into edgeR pipeline
edger edaseq offset written 7 months ago by alakatos80 • updated 7 months ago by Aaron Lun20k
2
votes
1
answer
308
views
1
answer
6
votes
2
answers
409
views
2
answers
1
vote
1
answer
259
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 9 months ago by llo0 • updated 9 months ago by davide risso740
1
vote
1
answer
406
views
1
answer
2
votes
1
answer
803
views
1
answer
How is the mean-variance plot calculated?
edaseq written 2.3 years ago by neverstop0 • updated 2.3 years ago by Wolfgang Huber13k
6
votes
2
answers
1.1k
views
2
answers
How to use normalized values by EDASeq in edgeR?
edger edaseq written 3.0 years ago by rahilsethi0 • updated 3.0 years ago by Gordon Smyth34k
0
votes
1
answer
820
views
1
answer
False positives due to GC content correction - DESeq2
edaseq deseq2 written 4.0 years ago by Guest User12k • updated 4.0 years ago by Michael Love19k
2
votes
1
answer
1.0k
views
1
answer
DESeq2 : Using Normalised ReadCount matrix from EDAseq in DESeq2
normalization edaseq deseq2 written 4.2 years ago by Guest User12k • updated 4.2 years ago by Michael Love19k
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votes
1
answer
1.0k
views
1
answer
EDASeq within normalization
normalization edaseq written 4.9 years ago by Catarina Almeida30 • updated 4.8 years ago by davide risso740
0
votes
1
answer
500
views
1
answer
problem with aveLogCPM.default in edgeR
edger edaseq written 5.3 years ago by suzy.stiegelmeyer@syngenta.com40 • updated 5.3 years ago by Gordon Smyth34k
0
votes
1
answer
883
views
1
answer
0
votes
1
answer
1.2k
views
1
answer
Large logCPM values when using offsets in edgeR for normalization
sequencing edger cqn edaseq written 5.4 years ago by Ying W90 • updated 5.4 years ago by Gordon Smyth34k
0
votes
1
answer
567
views
1
answer
using offsets from EDASeq and cqn for edgeR
cqn edaseq written 5.5 years ago by Gordon Smyth34k • updated 5.5 years ago by Kasper Daniel Hansen6.4k
0
votes
1
answer
699
views
1
answer
using offsets from EDASeq and cqn
go edger cqn edaseq written 5.5 years ago by love150
0
votes
2
answers
579
views
2
answers
problem in reading bam files with EDASeq
rsamtools edaseq assign written 6.6 years ago by rcaloger500 • updated 6.6 years ago by davide risso740
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