4
votes
2
answers
148
views
2
answers
GAGE after tximport
gage tximport written 6 weeks ago by Ed Siefker210 • updated 5 weeks ago by Luo Weijun1.4k
0
votes
1
answer
351
views
1
answer
GAGE: No significant output while it should have
gage written 3 months ago by littlefishes2010 • updated 10 weeks ago by Luo Weijun1.4k
1
vote
1
answer
108
views
1
answer
2
votes
5
answers
812
views
5
answers
0
votes
1
answer
187
views
1
answer
GAGE: no essential member genes for some DE pathways
gage written 7 months ago by aurelie.nicolas0 • updated 7 months ago by Luo Weijun1.4k
0
votes
1
answer
254
views
1
answer
GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathways gage R gsea written 7 months ago by snishtala030 • updated 7 months ago by Luo Weijun1.4k
0
votes
0
answers
174
views
0
answers
gage pca loadings
gage pca loadings written 8 months ago by MT0
0
votes
0
answers
230
views
0
answers
0
votes
0
answers
247
views
0
answers
0
votes
2
answers
318
views
2
answers
0
votes
1
answer
325
views
1
answer
Questions about Pathview, maybe also gage
gage pathview R written 17 months ago by ChIP-Tease0 • updated 11 months ago by bioinf0
0
votes
1
answer
257
views
1
answer
GAGE and Pathview from RNA-Seq: 'ref.idx' and 'samp.idx' when no replicates
gage pathview written 12 months ago by user3188830 • updated 12 months ago by Luo Weijun1.4k
1
vote
4
answers
381
views
4
answers
GO slim data for GAGE GSEA analysis
go gage gsea written 15 months ago by rubi80 • updated 13 months ago by Guangchuang Yu810
0
votes
1
answer
280
views
1
answer
0
votes
1
answer
340
views
1
answer
1
vote
2
answers
309
views
2
answers
DESeq2 rlog as input for GAGE
gage deseq2 written 17 months ago by Tom10
0
votes
3
answers
513
views
3
answers
0
votes
4
answers
405
views
4
answers
Gage and setp argument
gage gsea written 19 months ago by peter.chernek0
0
votes
1
answer
405
views
1
answer
Using Gage and pathview with previously processed data
rnaseq gage pathview R kegg written 22 months ago by bsguida0 • updated 22 months ago by Luo Weijun1.4k
1
vote
2
answers
448
views
2
answers
0
votes
1
answer
445
views
1
answer
0
votes
0
answers
952
views
0
answers
2
votes
1
answer
1.2k
views
1
answer
GAGE pathway analysis (R/Bioconductor): summarizeOverlaps error
gage summarizeoverlaps written 2.1 years ago by user3188830 • updated 2.1 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
4
answers
683
views
4
answers
0
votes
0
answers
368
views
0
answers
Detail of GAGE's esset.grp function
gage written 2.3 years ago by jackipchiho10
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