0
votes
1
answer
323
views
1
answer
GAGE: No significant output while it should have
gage written 7 weeks ago by littlefishes2010 • updated 14 days ago by Luo Weijun1.4k
1
vote
1
answer
58
views
1
answer
2
votes
5
answers
765
views
5
answers
0
votes
1
answer
155
views
1
answer
GAGE: no essential member genes for some DE pathways
gage written 5 months ago by aurelie.nicolas0 • updated 5 months ago by Luo Weijun1.4k
0
votes
1
answer
202
views
1
answer
GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathways gage R gsea written 5 months ago by snishtala030 • updated 5 months ago by Luo Weijun1.4k
0
votes
0
answers
151
views
0
answers
gage pca loadings
gage pca loadings written 6 months ago by MT0
0
votes
0
answers
201
views
0
answers
0
votes
0
answers
209
views
0
answers
0
votes
2
answers
283
views
2
answers
0
votes
1
answer
301
views
1
answer
Questions about Pathview, maybe also gage
gage pathview R written 15 months ago by ChIP-Tease0 • updated 9 months ago by bioinf0
0
votes
1
answer
231
views
1
answer
GAGE and Pathview from RNA-Seq: 'ref.idx' and 'samp.idx' when no replicates
gage pathview written 10 months ago by user3188830 • updated 10 months ago by Luo Weijun1.4k
1
vote
4
answers
347
views
4
answers
GO slim data for GAGE GSEA analysis
go gage gsea written 13 months ago by rubi70 • updated 11 months ago by Guangchuang Yu700
0
votes
1
answer
258
views
1
answer
0
votes
1
answer
299
views
1
answer
1
vote
2
answers
289
views
2
answers
DESeq2 rlog as input for GAGE
gage deseq2 written 15 months ago by Tom10
0
votes
3
answers
470
views
3
answers
0
votes
4
answers
379
views
4
answers
Gage and setp argument
gage gsea written 17 months ago by peter.chernek0
0
votes
1
answer
388
views
1
answer
Using Gage and pathview with previously processed data
rnaseq gage pathview R kegg written 20 months ago by bsguida0 • updated 20 months ago by Luo Weijun1.4k
1
vote
2
answers
414
views
2
answers
0
votes
1
answer
421
views
1
answer
0
votes
0
answers
905
views
0
answers
2
votes
1
answer
1.2k
views
1
answer
GAGE pathway analysis (R/Bioconductor): summarizeOverlaps error
gage summarizeoverlaps written 23 months ago by user3188830 • updated 23 months ago by Valerie Obenchain ♦♦ 6.3k
0
votes
4
answers
655
views
4
answers
0
votes
0
answers
343
views
0
answers
Detail of GAGE's esset.grp function
gage written 2.2 years ago by jackipchiho10
2
votes
1
answer
518
views
1
answer
Output from pathview does not seem to match input
gage pathview pathway analysis written 2.3 years ago by bdp0 • updated 2.3 years ago by Luo Weijun1.4k
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