7
votes
1
answer
128
views
1
answer
Strange error in bsseq when trying to assign seqinfo
genomicranges bsseq genomeinfodb seqinfo written 3 months ago by rcavalca120 • updated 3 months ago by Hervé Pagès ♦♦ 13k
1
vote
1
answer
153
views
1
answer
seqnames versus chrom
rtracklayer genomeinfodb biocgen written 7 months ago by felix.ernst0 • updated 7 months ago by Michael Lawrence10k
0
votes
1
answer
1.4k
views
1
answer
Trouble installing DESeq / GenomeInfoDb
deseq2 genomeinfodb written 12 months ago by nathan.medd0 • updated 12 months ago by James W. MacDonald47k
0
votes
0
answers
205
views
0
answers
0
votes
1
answer
209
views
1
answer
seqlevels/keepSeqLevels should set default pruning.mode by a getOption call
genomeinfodb written 14 months ago by matt.chambers4210 • updated 14 months ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
229
views
1
answer
GenomeInfoDb: where are the genome patches?
genomeinfodb seqnames written 14 months ago by matt.chambers4210 • updated 14 months ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
273
views
1
answer
seqlevelsStyle for chrY in Drosophila?
genomeinfodb seqlevelsstyle dmel written 14 months ago by liz.ingsimmons120 • updated 14 months ago by daniel.vantwisk30
0
votes
1
answer
367
views
1
answer
1
vote
2
answers
463
views
2
answers
3
votes
1
answer
598
views
1
answer
4
votes
1
answer
885
views
1
answer
7
votes
2
answers
1.1k
views
5 follow
2
answers
2
votes
1
answer
505
views
1
answer
GenomeInfoDb::extractSeqlevelsByGroup() on 'Canis familiaris'
canis familiaris genomeinfodb written 2.8 years ago by Robert Castelo2.2k • updated 2.8 years ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
513
views
0
answers
6
votes
1
answer
2.6k
views
1
answer
Get sequences for GRCh38 genome based on TxDb object locations
bsgenome transcriptdb genomeinfodb written 3.7 years ago by Diego Diez730 • updated 3.7 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
646
views
2
answers
keepStandardChromosomes doesn't respect ordering
genomeinfodb written 3.8 years ago by James W. MacDonald47k • updated 3.8 years ago by Sonali Arora370
0
votes
1
answer
587
views
1
answer
GenomeinfoDB
mus musculus genomeinfodb written 4.1 years ago by Guest User12k • updated 4.1 years ago by Sonali Arora370
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