0
votes
1
answer
105
views
1
answer
Issue using ballgown
genomeinfodb software error ballgown genomeinfodbdata written 11 weeks ago by dualeahmed0 • updated 11 weeks ago by James W. MacDonald48k
7
votes
1
answer
212
views
1
answer
Strange error in bsseq when trying to assign seqinfo
genomicranges bsseq genomeinfodb seqinfo written 7 months ago by rcavalca130 • updated 7 months ago by Hervé Pagès ♦♦ 13k
1
vote
1
answer
215
views
1
answer
seqnames versus chrom
rtracklayer genomeinfodb biocgen written 11 months ago by felix.ernst0 • updated 11 months ago by Michael Lawrence10k
0
votes
1
answer
1.8k
views
1
answer
Trouble installing DESeq / GenomeInfoDb
deseq2 genomeinfodb written 16 months ago by nathan.medd0 • updated 16 months ago by James W. MacDonald48k
0
votes
0
answers
250
views
0
answers
0
votes
1
answer
265
views
1
answer
seqlevels/keepSeqLevels should set default pruning.mode by a getOption call
genomeinfodb written 18 months ago by matt.chambers4210 • updated 18 months ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
274
views
1
answer
GenomeInfoDb: where are the genome patches?
genomeinfodb seqnames written 18 months ago by matt.chambers4210 • updated 18 months ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
317
views
1
answer
seqlevelsStyle for chrY in Drosophila?
genomeinfodb seqlevelsstyle dmel written 18 months ago by liz.ingsimmons120 • updated 18 months ago by daniel.vantwisk30
0
votes
1
answer
463
views
1
answer
1
vote
2
answers
537
views
2
answers
3
votes
1
answer
702
views
1
answer
4
votes
1
answer
1.0k
views
1
answer
7
votes
2
answers
1.3k
views
5 follow
2
answers
2
votes
1
answer
563
views
1
answer
GenomeInfoDb::extractSeqlevelsByGroup() on 'Canis familiaris'
canis familiaris genomeinfodb written 3.1 years ago by Robert Castelo2.2k • updated 3.1 years ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
557
views
0
answers
6
votes
1
answer
2.8k
views
1
answer
Get sequences for GRCh38 genome based on TxDb object locations
bsgenome transcriptdb genomeinfodb written 4.0 years ago by Diego Diez730 • updated 4.0 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
721
views
2
answers
keepStandardChromosomes doesn't respect ordering
genomeinfodb written 4.1 years ago by James W. MacDonald48k • updated 4.1 years ago by Sonali Arora370
0
votes
1
answer
644
views
1
answer
GenomeinfoDB
mus musculus genomeinfodb written 4.4 years ago by Guest User12k • updated 4.4 years ago by Sonali Arora370
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