7
votes
1
answer
80
views
1
answer
Strange error in bsseq when trying to assign seqinfo
genomicranges bsseq genomeinfodb seqinfo written 5 weeks ago by rcavalca110 • updated 5 weeks ago by Hervé Pagès ♦♦ 13k
1
vote
1
answer
132
views
1
answer
seqnames versus chrom
rtracklayer genomeinfodb biocgen written 5 months ago by felix.ernst0 • updated 5 months ago by Michael Lawrence10.0k
0
votes
1
answer
1.2k
views
1
answer
Trouble installing DESeq / GenomeInfoDb
deseq2 genomeinfodb written 10 months ago by nathan.medd0 • updated 10 months ago by James W. MacDonald46k
0
votes
0
answers
184
views
0
answers
0
votes
1
answer
195
views
1
answer
seqlevels/keepSeqLevels should set default pruning.mode by a getOption call
genomeinfodb written 12 months ago by matt.chambers4210 • updated 12 months ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
207
views
1
answer
GenomeInfoDb: where are the genome patches?
genomeinfodb seqnames written 13 months ago by matt.chambers4210 • updated 13 months ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
252
views
1
answer
seqlevelsStyle for chrY in Drosophila?
genomeinfodb seqlevelsstyle dmel written 13 months ago by liz.ingsimmons120 • updated 13 months ago by daniel.vantwisk30
0
votes
1
answer
345
views
1
answer
1
vote
2
answers
439
views
2
answers
3
votes
1
answer
568
views
1
answer
4
votes
1
answer
824
views
1
answer
7
votes
2
answers
1.1k
views
5 follow
2
answers
2
votes
1
answer
486
views
1
answer
GenomeInfoDb::extractSeqlevelsByGroup() on 'Canis familiaris'
canis familiaris genomeinfodb written 2.6 years ago by Robert Castelo2.2k • updated 2.6 years ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
501
views
0
answers
6
votes
1
answer
2.5k
views
1
answer
Get sequences for GRCh38 genome based on TxDb object locations
bsgenome transcriptdb genomeinfodb written 3.5 years ago by Diego Diez730 • updated 3.5 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
619
views
2
answers
keepStandardChromosomes doesn't respect ordering
genomeinfodb written 3.7 years ago by James W. MacDonald46k • updated 3.7 years ago by Sonali Arora370
0
votes
1
answer
571
views
1
answer
GenomeinfoDB
mus musculus genomeinfodb written 4.0 years ago by Guest User12k • updated 4.0 years ago by Sonali Arora370
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